Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CCDC83Q8IWF9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC83Q8IWF9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC83Q8IWF9 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC83Q8IWF9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC83Q8IWF9 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC83Q8IWF9 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC83Q8IWF9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC83Q8IWF9 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC83Q8IWF9 AC005104.2-201ENST00000427818 678 ntBASIC20.73■□□□□ 0.91
CCDC83Q8IWF9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC83Q8IWF9 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.73■□□□□ 0.91
CCDC83Q8IWF9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC83Q8IWF9 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CCDC83Q8IWF9 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC83Q8IWF9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC83Q8IWF9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC83Q8IWF9 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC83Q8IWF9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCDC83Q8IWF9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 AC063952.2-201ENST00000498792 1227 ntBASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCDC83Q8IWF9 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC83Q8IWF9 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC83Q8IWF9 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC83Q8IWF9 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC83Q8IWF9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC83Q8IWF9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC83Q8IWF9 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC83Q8IWF9 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC83Q8IWF9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC83Q8IWF9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CCDC83Q8IWF9 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC83Q8IWF9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC83Q8IWF9 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC83Q8IWF9 RN7SL850P-201ENST00000579959 291 ntBASIC20.71■□□□□ 0.91
CCDC83Q8IWF9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC83Q8IWF9 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CCDC83Q8IWF9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC83Q8IWF9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC83Q8IWF9 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC83Q8IWF9 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC83Q8IWF9 AC010460.3-201ENST00000511359 1579 ntBASIC20.71■□□□□ 0.91
CCDC83Q8IWF9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CCDC83Q8IWF9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CCDC83Q8IWF9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC83Q8IWF9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC83Q8IWF9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC83Q8IWF9 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC83Q8IWF9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC83Q8IWF9 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC83Q8IWF9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC83Q8IWF9 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC83Q8IWF9 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC83Q8IWF9 AC022616.7-201ENST00000525383 220 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms