Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.98■□□□□ 0.15
SHFQ7M4L6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SHFQ7M4L6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SHFQ7M4L6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHFQ7M4L6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHFQ7M4L6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SHFQ7M4L6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SHFQ7M4L6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
SHFQ7M4L6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
SHFQ7M4L6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SHFQ7M4L6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.97■□□□□ 0.15
SHFQ7M4L6 LINC00167-201ENST00000530583 1419 ntBASIC15.97■□□□□ 0.15
SHFQ7M4L6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SHFQ7M4L6 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHFQ7M4L6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHFQ7M4L6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHFQ7M4L6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHFQ7M4L6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
SHFQ7M4L6 AC009947.2-201ENST00000444014 672 ntBASIC15.97■□□□□ 0.15
SHFQ7M4L6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.97■□□□□ 0.15
SHFQ7M4L6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SHFQ7M4L6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.97■□□□□ 0.15
SHFQ7M4L6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
SHFQ7M4L6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.97■□□□□ 0.15
SHFQ7M4L6 AC024243.1-201ENST00000609234 778 ntBASIC15.97■□□□□ 0.15
SHFQ7M4L6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.97■□□□□ 0.15
SHFQ7M4L6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.97■□□□□ 0.15
SHFQ7M4L6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.97■□□□□ 0.15
SHFQ7M4L6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SHFQ7M4L6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.97■□□□□ 0.15
SHFQ7M4L6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SHFQ7M4L6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.97■□□□□ 0.15
SHFQ7M4L6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.97■□□□□ 0.15
SHFQ7M4L6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SHFQ7M4L6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHFQ7M4L6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
SHFQ7M4L6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SHFQ7M4L6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SHFQ7M4L6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.96■□□□□ 0.15
SHFQ7M4L6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHFQ7M4L6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SHFQ7M4L6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SHFQ7M4L6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHFQ7M4L6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHFQ7M4L6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.96■□□□□ 0.15
SHFQ7M4L6 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
SHFQ7M4L6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SHFQ7M4L6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SHFQ7M4L6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SHFQ7M4L6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHFQ7M4L6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHFQ7M4L6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
SHFQ7M4L6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHFQ7M4L6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHFQ7M4L6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHFQ7M4L6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.96■□□□□ 0.15
SHFQ7M4L6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHFQ7M4L6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
SHFQ7M4L6 AP000523.1-201ENST00000398242 1049 ntBASIC15.96■□□□□ 0.15
SHFQ7M4L6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SHFQ7M4L6 HMGA1P5-201ENST00000412453 271 ntBASIC15.96■□□□□ 0.15
SHFQ7M4L6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHFQ7M4L6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.96■□□□□ 0.15
SHFQ7M4L6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SHFQ7M4L6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.96■□□□□ 0.15
SHFQ7M4L6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.96■□□□□ 0.15
SHFQ7M4L6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.96■□□□□ 0.15
SHFQ7M4L6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.96■□□□□ 0.15
SHFQ7M4L6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SHFQ7M4L6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.96■□□□□ 0.15
SHFQ7M4L6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.96■□□□□ 0.15
SHFQ7M4L6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
SHFQ7M4L6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.96■□□□□ 0.15
SHFQ7M4L6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHFQ7M4L6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SHFQ7M4L6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.96■□□□□ 0.15
SHFQ7M4L6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.96■□□□□ 0.15
SHFQ7M4L6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHFQ7M4L6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHFQ7M4L6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHFQ7M4L6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHFQ7M4L6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.96■□□□□ 0.15
SHFQ7M4L6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.96■□□□□ 0.15
SHFQ7M4L6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SHFQ7M4L6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.96■□□□□ 0.15
SHFQ7M4L6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHFQ7M4L6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SHFQ7M4L6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SHFQ7M4L6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SHFQ7M4L6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SHFQ7M4L6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
SHFQ7M4L6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.96■□□□□ 0.14
SHFQ7M4L6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SHFQ7M4L6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.95■□□□□ 0.14
SHFQ7M4L6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SHFQ7M4L6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.95■□□□□ 0.14
SHFQ7M4L6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHFQ7M4L6 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHFQ7M4L6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
SHFQ7M4L6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms