Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 AL356309.3-201ENST00000624132 1934 ntBASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
CCDC178Q5BJE1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC178Q5BJE1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CCDC178Q5BJE1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC178Q5BJE1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CCDC178Q5BJE1 AC018470.1-201ENST00000624790 3129 ntBASIC20.62■□□□□ 0.89
CCDC178Q5BJE1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC178Q5BJE1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.62■□□□□ 0.89
CCDC178Q5BJE1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC178Q5BJE1 AC104692.2-201ENST00000603054 253 ntBASIC20.62■□□□□ 0.89
CCDC178Q5BJE1 AC064862.7-201ENST00000604520 867 ntBASIC20.62■□□□□ 0.89
CCDC178Q5BJE1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC178Q5BJE1 AL031008.1-201ENST00000619963 541 ntBASIC20.62■□□□□ 0.89
CCDC178Q5BJE1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC178Q5BJE1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC178Q5BJE1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CCDC178Q5BJE1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC178Q5BJE1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC178Q5BJE1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CCDC178Q5BJE1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CCDC178Q5BJE1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC178Q5BJE1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 REXO1L11P-201ENST00000620964 1927 ntBASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 AL020989.1-201ENST00000422979 469 ntBASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 PRYP5-201ENST00000451909 266 ntBASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
CCDC178Q5BJE1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC178Q5BJE1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC178Q5BJE1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC178Q5BJE1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCDC178Q5BJE1 KLF4P1-201ENST00000412782 1185 ntBASIC20.6■□□□□ 0.89
CCDC178Q5BJE1 SPDYE21P-201ENST00000413323 827 ntBASIC20.6■□□□□ 0.89
CCDC178Q5BJE1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC178Q5BJE1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC178Q5BJE1 AC079781.3-201ENST00000449110 356 ntBASIC20.6■□□□□ 0.89
CCDC178Q5BJE1 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC178Q5BJE1 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.6■□□□□ 0.89
CCDC178Q5BJE1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC178Q5BJE1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC178Q5BJE1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC178Q5BJE1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC178Q5BJE1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC178Q5BJE1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC178Q5BJE1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC178Q5BJE1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC178Q5BJE1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC178Q5BJE1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
CCDC178Q5BJE1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
CCDC178Q5BJE1 HLA-J-201ENST00000462773 1622 ntBASIC20.6■□□□□ 0.89
CCDC178Q5BJE1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
CCDC178Q5BJE1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 STK19B-204ENST00000512515 211 ntBASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms