Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KHDC1Q4VXA5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.89■□□□□ 0.45
KHDC1Q4VXA5 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
KHDC1Q4VXA5 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
KHDC1Q4VXA5 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
KHDC1Q4VXA5 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
KHDC1Q4VXA5 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.89■□□□□ 0.45
KHDC1Q4VXA5 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KHDC1Q4VXA5 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KHDC1Q4VXA5 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KHDC1Q4VXA5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KHDC1Q4VXA5 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KHDC1Q4VXA5 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KHDC1Q4VXA5 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KHDC1Q4VXA5 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KHDC1Q4VXA5 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
KHDC1Q4VXA5 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 CICP6-201ENST00000457191 2729 ntBASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 MIR3180-1-201ENST00000580374 94 ntBASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 MIR3180-3-201ENST00000584616 94 ntBASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 HCG11-201ENST00000411553 5696 ntBASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KHDC1Q4VXA5 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KHDC1Q4VXA5 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KHDC1Q4VXA5 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
KHDC1Q4VXA5 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KHDC1Q4VXA5 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.87■□□□□ 0.45
KHDC1Q4VXA5 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.87■□□□□ 0.45
KHDC1Q4VXA5 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KHDC1Q4VXA5 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.87■□□□□ 0.45
KHDC1Q4VXA5 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
KHDC1Q4VXA5 CHCHD2P8-201ENST00000429873 447 ntBASIC17.87■□□□□ 0.45
KHDC1Q4VXA5 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.87■□□□□ 0.45
KHDC1Q4VXA5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.87■□□□□ 0.45
KHDC1Q4VXA5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.87■□□□□ 0.45
KHDC1Q4VXA5 RN7SL606P-201ENST00000472779 293 ntBASIC17.87■□□□□ 0.45
KHDC1Q4VXA5 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.87■□□□□ 0.45
KHDC1Q4VXA5 AC092119.3-201ENST00000612618 583 ntBASIC17.87■□□□□ 0.45
KHDC1Q4VXA5 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KHDC1Q4VXA5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KHDC1Q4VXA5 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KHDC1Q4VXA5 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
KHDC1Q4VXA5 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KHDC1Q4VXA5 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.87■□□□□ 0.45
KHDC1Q4VXA5 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KHDC1Q4VXA5 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KHDC1Q4VXA5 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
KHDC1Q4VXA5 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KHDC1Q4VXA5 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
KHDC1Q4VXA5 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KHDC1Q4VXA5 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
KHDC1Q4VXA5 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
KHDC1Q4VXA5 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KHDC1Q4VXA5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KHDC1Q4VXA5 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.86■□□□□ 0.45
KHDC1Q4VXA5 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
KHDC1Q4VXA5 AL845331.1-201ENST00000424978 1190 ntBASIC17.86■□□□□ 0.45
KHDC1Q4VXA5 ATP5G2P1-201ENST00000433580 426 ntBASIC17.86■□□□□ 0.45
KHDC1Q4VXA5 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.86■□□□□ 0.45
KHDC1Q4VXA5 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.86■□□□□ 0.45
KHDC1Q4VXA5 AP002414.4-201ENST00000589764 1148 ntBASIC17.86■□□□□ 0.45
KHDC1Q4VXA5 AL592071.1-201ENST00000611956 408 ntBASIC17.86■□□□□ 0.45
KHDC1Q4VXA5 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
KHDC1Q4VXA5 UBALD1-205ENST00000590891 2641 ntBASIC17.86■□□□□ 0.45
KHDC1Q4VXA5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KHDC1Q4VXA5 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KHDC1Q4VXA5 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
KHDC1Q4VXA5 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.86■□□□□ 0.45
KHDC1Q4VXA5 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
KHDC1Q4VXA5 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms