Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN4P51793 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.49■□□□□ 0.55
CLCN4P51793 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.49■□□□□ 0.55
CLCN4P51793 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN4P51793 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN4P51793 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN4P51793 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN4P51793 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CLCN4P51793 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
CLCN4P51793 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN4P51793 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CLCN4P51793 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.48■□□□□ 0.55
CLCN4P51793 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.48■□□□□ 0.55
CLCN4P51793 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN4P51793 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN4P51793 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN4P51793 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN4P51793 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN4P51793 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN4P51793 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
CLCN4P51793 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.48■□□□□ 0.55
CLCN4P51793 STK19B-204ENST00000512515 211 ntBASIC18.48■□□□□ 0.55
CLCN4P51793 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN4P51793 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.48■□□□□ 0.55
CLCN4P51793 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.48■□□□□ 0.55
CLCN4P51793 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN4P51793 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN4P51793 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN4P51793 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN4P51793 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN4P51793 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.48■□□□□ 0.55
CLCN4P51793 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN4P51793 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN4P51793 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CLCN4P51793 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.48■□□□□ 0.55
CLCN4P51793 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
CLCN4P51793 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN4P51793 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN4P51793 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN4P51793 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN4P51793 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.47■□□□□ 0.55
CLCN4P51793 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN4P51793 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN4P51793 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.47■□□□□ 0.55
CLCN4P51793 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.47■□□□□ 0.55
CLCN4P51793 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.47■□□□□ 0.55
CLCN4P51793 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN4P51793 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN4P51793 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN4P51793 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.47■□□□□ 0.55
CLCN4P51793 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.47■□□□□ 0.55
CLCN4P51793 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.47■□□□□ 0.55
CLCN4P51793 AL078644.1-201ENST00000609881 752 ntBASIC18.47■□□□□ 0.55
CLCN4P51793 AC116407.2-201ENST00000613639 860 ntBASIC18.47■□□□□ 0.55
CLCN4P51793 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.47■□□□□ 0.55
CLCN4P51793 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.47■□□□□ 0.55
CLCN4P51793 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CLCN4P51793 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN4P51793 AC100803.2-201ENST00000562459 1963 ntBASIC18.47■□□□□ 0.55
CLCN4P51793 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.47■□□□□ 0.55
CLCN4P51793 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN4P51793 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN4P51793 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CLCN4P51793 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN4P51793 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN4P51793 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN4P51793 ELL2P1-201ENST00000413990 1906 ntBASIC18.47■□□□□ 0.55
CLCN4P51793 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCN4P51793 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CLCN4P51793 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.46■□□□□ 0.55
CLCN4P51793 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.46■□□□□ 0.55
CLCN4P51793 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN4P51793 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.46■□□□□ 0.55
CLCN4P51793 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN4P51793 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.46■□□□□ 0.55
CLCN4P51793 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN4P51793 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN4P51793 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN4P51793 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN4P51793 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLCN4P51793 BX276092.7-203ENST00000637198 1536 ntBASIC18.46■□□□□ 0.55
CLCN4P51793 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.46■□□□□ 0.55
CLCN4P51793 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN4P51793 MRPL20P1-201ENST00000400819 433 ntBASIC18.46■□□□□ 0.55
CLCN4P51793 CNN2P11-201ENST00000429351 262 ntBASIC18.46■□□□□ 0.55
CLCN4P51793 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.46■□□□□ 0.55
CLCN4P51793 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.46■□□□□ 0.55
CLCN4P51793 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.46■□□□□ 0.55
CLCN4P51793 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.46■□□□□ 0.55
CLCN4P51793 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN4P51793 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN4P51793 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.46■□□□□ 0.55
CLCN4P51793 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CLCN4P51793 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.46■□□□□ 0.55
CLCN4P51793 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.46■□□□□ 0.55
CLCN4P51793 AC093677.2-201ENST00000600169 1863 ntBASIC18.46■□□□□ 0.54
CLCN4P51793 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CLCN4P51793 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN4P51793 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
CLCN4P51793 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms