Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RAB28P51157 PMPCAP1-201ENST00000508114 1576 ntBASIC17.03■□□□□ 0.32
RAB28P51157 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB28P51157 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RAB28P51157 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RAB28P51157 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB28P51157 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB28P51157 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB28P51157 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB28P51157 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB28P51157 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB28P51157 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB28P51157 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB28P51157 TPM4P1-201ENST00000436100 807 ntBASIC17.03■□□□□ 0.32
RAB28P51157 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB28P51157 FAAHP1-202ENST00000446499 1238 ntBASIC17.03■□□□□ 0.32
RAB28P51157 EMBP1-201ENST00000458200 901 ntBASIC17.03■□□□□ 0.32
RAB28P51157 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.03■□□□□ 0.32
RAB28P51157 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.03■□□□□ 0.32
RAB28P51157 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RAB28P51157 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB28P51157 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB28P51157 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB28P51157 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.03■□□□□ 0.32
RAB28P51157 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB28P51157 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB28P51157 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB28P51157 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB28P51157 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB28P51157 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB28P51157 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB28P51157 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RAB28P51157 AC133963.1-201ENST00000504166 1679 ntBASIC17.03■□□□□ 0.32
RAB28P51157 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB28P51157 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB28P51157 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB28P51157 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
RAB28P51157 HLA-J-201ENST00000462773 1622 ntBASIC17.03■□□□□ 0.32
RAB28P51157 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAB28P51157 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RAB28P51157 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.02■□□□□ 0.32
RAB28P51157 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAB28P51157 AL133373.2-201ENST00000623187 2828 ntBASIC17.02■□□□□ 0.32
RAB28P51157 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAB28P51157 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
RAB28P51157 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.02■□□□□ 0.32
RAB28P51157 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB28P51157 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB28P51157 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB28P51157 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RAB28P51157 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB28P51157 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB28P51157 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAB28P51157 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB28P51157 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.02■□□□□ 0.32
RAB28P51157 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB28P51157 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.02■□□□□ 0.32
RAB28P51157 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RAB28P51157 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.02■□□□□ 0.32
RAB28P51157 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.02■□□□□ 0.32
RAB28P51157 AC073592.5-201ENST00000624854 528 ntBASIC17.02■□□□□ 0.32
RAB28P51157 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.02■□□□□ 0.32
RAB28P51157 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.02■□□□□ 0.32
RAB28P51157 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB28P51157 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
RAB28P51157 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB28P51157 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RAB28P51157 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.02■□□□□ 0.31
RAB28P51157 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.02■□□□□ 0.31
RAB28P51157 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAB28P51157 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.02■□□□□ 0.31
RAB28P51157 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAB28P51157 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB28P51157 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB28P51157 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB28P51157 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB28P51157 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB28P51157 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB28P51157 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB28P51157 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.01■□□□□ 0.31
RAB28P51157 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB28P51157 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB28P51157 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB28P51157 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB28P51157 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB28P51157 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB28P51157 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB28P51157 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.01■□□□□ 0.31
RAB28P51157 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB28P51157 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB28P51157 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB28P51157 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB28P51157 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB28P51157 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB28P51157 AC008608.2-201ENST00000606089 416 ntBASIC17.01■□□□□ 0.31
RAB28P51157 AL355877.3-201ENST00000622820 899 ntBASIC17.01■□□□□ 0.31
RAB28P51157 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB28P51157 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB28P51157 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB28P51157 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms