Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.06■□□□□ 0.64
TNFSF9P41273 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFSF9P41273 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TNFSF9P41273 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TNFSF9P41273 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TNFSF9P41273 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFSF9P41273 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.06■□□□□ 0.64
TNFSF9P41273 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TNFSF9P41273 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TNFSF9P41273 STK25P1-201ENST00000585406 838 ntBASIC19.06■□□□□ 0.64
TNFSF9P41273 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.06■□□□□ 0.64
TNFSF9P41273 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFSF9P41273 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.06■□□□□ 0.64
TNFSF9P41273 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TNFSF9P41273 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFSF9P41273 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.06■□□□□ 0.64
TNFSF9P41273 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFSF9P41273 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFSF9P41273 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFSF9P41273 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
TNFSF9P41273 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFSF9P41273 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TNFSF9P41273 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TNFSF9P41273 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFSF9P41273 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TNFSF9P41273 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TNFSF9P41273 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.05■□□□□ 0.64
TNFSF9P41273 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TNFSF9P41273 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
TNFSF9P41273 HNRNPDP1-201ENST00000439535 754 ntBASIC19.05■□□□□ 0.64
TNFSF9P41273 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.05■□□□□ 0.64
TNFSF9P41273 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TNFSF9P41273 RNPS1P1-201ENST00000507437 918 ntBASIC19.05■□□□□ 0.64
TNFSF9P41273 IGHV3-52-201ENST00000519770 353 ntBASIC19.05■□□□□ 0.64
TNFSF9P41273 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.05■□□□□ 0.64
TNFSF9P41273 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.05■□□□□ 0.64
TNFSF9P41273 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.05■□□□□ 0.64
TNFSF9P41273 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.05■□□□□ 0.64
TNFSF9P41273 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.05■□□□□ 0.64
TNFSF9P41273 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.05■□□□□ 0.64
TNFSF9P41273 AL139288.1-201ENST00000623748 933 ntBASIC19.05■□□□□ 0.64
TNFSF9P41273 AC073592.4-201ENST00000623827 446 ntBASIC19.05■□□□□ 0.64
TNFSF9P41273 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFSF9P41273 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TNFSF9P41273 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TNFSF9P41273 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TNFSF9P41273 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFSF9P41273 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFSF9P41273 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TNFSF9P41273 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TNFSF9P41273 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.05■□□□□ 0.64
TNFSF9P41273 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
TNFSF9P41273 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TNFSF9P41273 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
TNFSF9P41273 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF9P41273 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF9P41273 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF9P41273 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.04■□□□□ 0.64
TNFSF9P41273 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF9P41273 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.04■□□□□ 0.64
TNFSF9P41273 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF9P41273 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TNFSF9P41273 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF9P41273 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
TNFSF9P41273 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF9P41273 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF9P41273 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.04■□□□□ 0.64
TNFSF9P41273 KLF4P1-201ENST00000412782 1185 ntBASIC19.04■□□□□ 0.64
TNFSF9P41273 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.04■□□□□ 0.64
TNFSF9P41273 KRT18P67-201ENST00000432816 1264 ntBASIC19.04■□□□□ 0.64
TNFSF9P41273 AC018712.1-201ENST00000455767 687 ntBASIC19.04■□□□□ 0.64
TNFSF9P41273 RNA5SP419-201ENST00000515908 135 ntBASIC19.04■□□□□ 0.64
TNFSF9P41273 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF9P41273 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.04■□□□□ 0.64
TNFSF9P41273 AC025062.2-201ENST00000605477 670 ntBASIC19.04■□□□□ 0.64
TNFSF9P41273 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF9P41273 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.04■□□□□ 0.64
TNFSF9P41273 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TNFSF9P41273 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
TNFSF9P41273 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF9P41273 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.04■□□□□ 0.64
TNFSF9P41273 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF9P41273 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF9P41273 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF9P41273 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF9P41273 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TNFSF9P41273 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.03■□□□□ 0.64
TNFSF9P41273 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF9P41273 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TNFSF9P41273 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF9P41273 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF9P41273 SIGLEC16-201ENST00000599858 1437 ntBASIC19.03■□□□□ 0.64
TNFSF9P41273 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.03■□□□□ 0.64
TNFSF9P41273 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF9P41273 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF9P41273 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF9P41273 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF9P41273 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TNFSF9P41273 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF9P41273 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 1305.3 ms