Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFC1P35251 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.61■□□□□ 0.57
RFC1P35251 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFC1P35251 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
RFC1P35251 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFC1P35251 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RFC1P35251 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFC1P35251 CHCHD2P8-201ENST00000429873 447 ntBASIC18.61■□□□□ 0.57
RFC1P35251 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.61■□□□□ 0.57
RFC1P35251 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.61■□□□□ 0.57
RFC1P35251 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RFC1P35251 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.61■□□□□ 0.57
RFC1P35251 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.61■□□□□ 0.57
RFC1P35251 LINC01451-201ENST00000623792 534 ntBASIC18.61■□□□□ 0.57
RFC1P35251 AL358472.4-201ENST00000633140 710 ntBASIC18.61■□□□□ 0.57
RFC1P35251 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFC1P35251 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFC1P35251 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RFC1P35251 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFC1P35251 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.61■□□□□ 0.57
RFC1P35251 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
RFC1P35251 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RFC1P35251 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFC1P35251 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFC1P35251 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFC1P35251 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFC1P35251 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.6■□□□□ 0.57
RFC1P35251 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFC1P35251 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFC1P35251 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.6■□□□□ 0.57
RFC1P35251 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.6■□□□□ 0.57
RFC1P35251 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.6■□□□□ 0.57
RFC1P35251 BX276092.7-203ENST00000637198 1536 ntBASIC18.6■□□□□ 0.57
RFC1P35251 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFC1P35251 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFC1P35251 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
RFC1P35251 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFC1P35251 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFC1P35251 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RFC1P35251 MIR1224-201ENST00000408193 85 ntBASIC18.6■□□□□ 0.57
RFC1P35251 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.6■□□□□ 0.57
RFC1P35251 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFC1P35251 AC011840.4-201ENST00000578471 627 ntBASIC18.6■□□□□ 0.57
RFC1P35251 AC005336.2-201ENST00000593183 939 ntBASIC18.6■□□□□ 0.57
RFC1P35251 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RFC1P35251 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFC1P35251 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFC1P35251 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFC1P35251 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.6■□□□□ 0.57
RFC1P35251 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.6■□□□□ 0.57
RFC1P35251 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFC1P35251 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RFC1P35251 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.6■□□□□ 0.57
RFC1P35251 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFC1P35251 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFC1P35251 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFC1P35251 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.6■□□□□ 0.57
RFC1P35251 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.6■□□□□ 0.57
RFC1P35251 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC1P35251 AC141586.5-201ENST00000624546 2050 ntBASIC18.59■□□□□ 0.57
RFC1P35251 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC1P35251 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.59■□□□□ 0.57
RFC1P35251 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC1P35251 AC125634.1-201ENST00000438758 1403 ntBASIC18.59■□□□□ 0.57
RFC1P35251 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RFC1P35251 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC1P35251 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFC1P35251 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC1P35251 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC1P35251 ARMC10P1-201ENST00000313754 855 ntBASIC18.59■□□□□ 0.57
RFC1P35251 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFC1P35251 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC1P35251 TSSC2-201ENST00000450217 709 ntBASIC18.59■□□□□ 0.57
RFC1P35251 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.59■□□□□ 0.57
RFC1P35251 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFC1P35251 AC091607.1-201ENST00000490318 1060 ntBASIC18.59■□□□□ 0.57
RFC1P35251 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.59■□□□□ 0.57
RFC1P35251 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RFC1P35251 AP000550.4-202ENST00000639755 178 ntBASIC18.59■□□□□ 0.57
RFC1P35251 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC1P35251 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFC1P35251 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC1P35251 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC1P35251 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.59■□□□□ 0.57
RFC1P35251 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC1P35251 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC1P35251 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFC1P35251 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC1P35251 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RFC1P35251 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
RFC1P35251 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFC1P35251 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RFC1P35251 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFC1P35251 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RFC1P35251 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RFC1P35251 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RFC1P35251 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RFC1P35251 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
RFC1P35251 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RFC1P35251 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms