Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.75■■□□□ 1.07
TM4SF1P30408 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF1P30408 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.75■■□□□ 1.07
TM4SF1P30408 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF1P30408 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF1P30408 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.75■■□□□ 1.07
TM4SF1P30408 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF1P30408 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF1P30408 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC21.74■■□□□ 1.07
TM4SF1P30408 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TM4SF1P30408 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.74■■□□□ 1.07
TM4SF1P30408 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.74■■□□□ 1.07
TM4SF1P30408 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
TM4SF1P30408 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TM4SF1P30408 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TM4SF1P30408 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TM4SF1P30408 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TM4SF1P30408 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TM4SF1P30408 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC21.74■■□□□ 1.07
TM4SF1P30408 SLC25A6P2-201ENST00000497974 877 ntBASIC21.74■■□□□ 1.07
TM4SF1P30408 AL512356.2-201ENST00000546955 174 ntBASIC21.74■■□□□ 1.07
TM4SF1P30408 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.74■■□□□ 1.07
TM4SF1P30408 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TM4SF1P30408 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TM4SF1P30408 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TM4SF1P30408 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TM4SF1P30408 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TM4SF1P30408 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TM4SF1P30408 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TM4SF1P30408 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.73■■□□□ 1.07
TM4SF1P30408 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
TM4SF1P30408 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TM4SF1P30408 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TM4SF1P30408 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.73■■□□□ 1.07
TM4SF1P30408 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.73■■□□□ 1.07
TM4SF1P30408 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.73■■□□□ 1.07
TM4SF1P30408 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TM4SF1P30408 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TM4SF1P30408 CYP51A1P2-201ENST00000419457 1499 ntBASIC21.73■■□□□ 1.07
TM4SF1P30408 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TM4SF1P30408 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TM4SF1P30408 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TM4SF1P30408 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TM4SF1P30408 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC21.73■■□□□ 1.07
TM4SF1P30408 AC055876.3-201ENST00000431496 288 ntBASIC21.73■■□□□ 1.07
TM4SF1P30408 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC21.73■■□□□ 1.07
TM4SF1P30408 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.73■■□□□ 1.07
TM4SF1P30408 VPS29-207ENST00000549970 818 ntTSL 3 BASIC21.73■■□□□ 1.07
TM4SF1P30408 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC21.73■■□□□ 1.07
TM4SF1P30408 AC138649.4-201ENST00000612222 287 ntBASIC21.73■■□□□ 1.07
TM4SF1P30408 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TM4SF1P30408 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TM4SF1P30408 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TM4SF1P30408 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.73■■□□□ 1.07
TM4SF1P30408 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.73■■□□□ 1.07
TM4SF1P30408 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TM4SF1P30408 AC135776.1-201ENST00000319817 2481 ntBASIC21.72■■□□□ 1.07
TM4SF1P30408 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.72■■□□□ 1.07
TM4SF1P30408 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
TM4SF1P30408 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TM4SF1P30408 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC21.72■■□□□ 1.07
TM4SF1P30408 FAM58DP-201ENST00000428076 619 ntBASIC21.72■■□□□ 1.07
TM4SF1P30408 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC21.72■■□□□ 1.07
TM4SF1P30408 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC21.72■■□□□ 1.07
TM4SF1P30408 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TM4SF1P30408 AC069335.1-201ENST00000489972 472 ntBASIC21.72■■□□□ 1.07
TM4SF1P30408 AC093214.1-201ENST00000511688 1107 ntBASIC21.72■■□□□ 1.07
TM4SF1P30408 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC21.72■■□□□ 1.07
TM4SF1P30408 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.72■■□□□ 1.07
TM4SF1P30408 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.72■■□□□ 1.07
TM4SF1P30408 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC21.72■■□□□ 1.07
TM4SF1P30408 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.72■■□□□ 1.07
TM4SF1P30408 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TM4SF1P30408 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.72■■□□□ 1.07
TM4SF1P30408 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.72■■□□□ 1.07
TM4SF1P30408 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.72■■□□□ 1.07
TM4SF1P30408 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC21.71■■□□□ 1.07
TM4SF1P30408 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
TM4SF1P30408 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TM4SF1P30408 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.71■■□□□ 1.07
TM4SF1P30408 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TM4SF1P30408 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TM4SF1P30408 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TM4SF1P30408 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TM4SF1P30408 MIR661-201ENST00000384842 89 ntBASIC21.71■■□□□ 1.07
TM4SF1P30408 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC21.71■■□□□ 1.07
TM4SF1P30408 NABP1-203ENST00000409510 843 ntTSL 5 BASIC21.71■■□□□ 1.07
TM4SF1P30408 PMS2P4-201ENST00000412466 1052 ntBASIC21.71■■□□□ 1.07
TM4SF1P30408 AC140658.5-201ENST00000438532 169 ntBASIC21.71■■□□□ 1.07
TM4SF1P30408 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC21.71■■□□□ 1.07
TM4SF1P30408 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TM4SF1P30408 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC21.71■■□□□ 1.07
TM4SF1P30408 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC21.71■■□□□ 1.07
TM4SF1P30408 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TM4SF1P30408 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TM4SF1P30408 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.71■■□□□ 1.07
TM4SF1P30408 FAM86C2P-203ENST00000528684 1004 ntBASIC21.71■■□□□ 1.07
TM4SF1P30408 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC21.71■■□□□ 1.07
TM4SF1P30408 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TM4SF1P30408 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms