Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP24386 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.52■□□□□ 0.24
CHMP24386 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP24386 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CHMP24386 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP24386 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP24386 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.52■□□□□ 0.24
CHMP24386 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.52■□□□□ 0.24
CHMP24386 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.52■□□□□ 0.24
CHMP24386 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP24386 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.52■□□□□ 0.24
CHMP24386 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.52■□□□□ 0.24
CHMP24386 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP24386 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CHMP24386 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP24386 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP24386 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CHMP24386 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP24386 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.52■□□□□ 0.23
CHMP24386 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP24386 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.52■□□□□ 0.23
CHMP24386 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.52■□□□□ 0.23
CHMP24386 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.52■□□□□ 0.23
CHMP24386 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP24386 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CHMP24386 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP24386 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP24386 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP24386 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP24386 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP24386 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP24386 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.51■□□□□ 0.23
CHMP24386 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP24386 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.51■□□□□ 0.23
CHMP24386 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CHMP24386 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP24386 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.51■□□□□ 0.23
CHMP24386 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP24386 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.51■□□□□ 0.23
CHMP24386 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.51■□□□□ 0.23
CHMP24386 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP24386 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP24386 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP24386 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP24386 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP24386 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.51■□□□□ 0.23
CHMP24386 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.51■□□□□ 0.23
CHMP24386 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.51■□□□□ 0.23
CHMP24386 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.51■□□□□ 0.23
CHMP24386 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.51■□□□□ 0.23
CHMP24386 AL121672.3-201ENST00000608644 468 ntBASIC16.51■□□□□ 0.23
CHMP24386 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP24386 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP24386 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.51■□□□□ 0.23
CHMP24386 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP24386 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP24386 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP24386 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.51■□□□□ 0.23
CHMP24386 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP24386 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP24386 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP24386 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP24386 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP24386 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.51■□□□□ 0.23
CHMP24386 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.51■□□□□ 0.23
CHMP24386 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CHMP24386 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.51■□□□□ 0.23
CHMP24386 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CHMP24386 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP24386 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP24386 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP24386 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP24386 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP24386 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
CHMP24386 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CHMP24386 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CHMP24386 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CHMP24386 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP24386 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP24386 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP24386 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.5■□□□□ 0.23
CHMP24386 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP24386 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP24386 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CHMP24386 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP24386 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP24386 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP24386 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.5■□□□□ 0.23
CHMP24386 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP24386 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.5■□□□□ 0.23
CHMP24386 BX276092.5-203ENST00000456199 560 ntBASIC16.5■□□□□ 0.23
CHMP24386 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.5■□□□□ 0.23
CHMP24386 KRT8P26-201ENST00000534154 1276 ntBASIC16.5■□□□□ 0.23
CHMP24386 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.5■□□□□ 0.23
CHMP24386 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CHMP24386 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CHMP24386 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CHMP24386 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP24386 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP24386 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms