Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL11A1P12107 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL11A1P12107 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL11A1P12107 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.88■□□□□ 0.77
COL11A1P12107 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL11A1P12107 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL11A1P12107 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.88■□□□□ 0.77
COL11A1P12107 PAWRP1-201ENST00000451083 565 ntBASIC19.88■□□□□ 0.77
COL11A1P12107 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.88■□□□□ 0.77
COL11A1P12107 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.88■□□□□ 0.77
COL11A1P12107 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.88■□□□□ 0.77
COL11A1P12107 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.88■□□□□ 0.77
COL11A1P12107 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.88■□□□□ 0.77
COL11A1P12107 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL11A1P12107 AC091812.2-201ENST00000619081 385 ntBASIC19.88■□□□□ 0.77
COL11A1P12107 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL11A1P12107 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL11A1P12107 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.88■□□□□ 0.77
COL11A1P12107 AC006116.8-202ENST00000587620 1550 ntBASIC19.87■□□□□ 0.77
COL11A1P12107 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.87■□□□□ 0.77
COL11A1P12107 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL11A1P12107 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL11A1P12107 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL11A1P12107 BICD1-207ENST00000551848 1962 ntBASIC19.87■□□□□ 0.77
COL11A1P12107 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL11A1P12107 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL11A1P12107 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL11A1P12107 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL11A1P12107 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
COL11A1P12107 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.87■□□□□ 0.77
COL11A1P12107 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL11A1P12107 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.87■□□□□ 0.77
COL11A1P12107 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.87■□□□□ 0.77
COL11A1P12107 AC007064.4-201ENST00000637740 555 ntBASIC19.87■□□□□ 0.77
COL11A1P12107 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL11A1P12107 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL11A1P12107 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL11A1P12107 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL11A1P12107 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL11A1P12107 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
COL11A1P12107 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL11A1P12107 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.87■□□□□ 0.77
COL11A1P12107 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
COL11A1P12107 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
COL11A1P12107 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.86■□□□□ 0.77
COL11A1P12107 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL11A1P12107 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL11A1P12107 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL11A1P12107 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
COL11A1P12107 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL11A1P12107 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.86■□□□□ 0.77
COL11A1P12107 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.86■□□□□ 0.77
COL11A1P12107 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.86■□□□□ 0.77
COL11A1P12107 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL11A1P12107 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
COL11A1P12107 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.86■□□□□ 0.77
COL11A1P12107 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL11A1P12107 BCAR1-209ENST00000546196 1340 ntBASIC19.86■□□□□ 0.77
COL11A1P12107 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL11A1P12107 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL11A1P12107 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.86■□□□□ 0.77
COL11A1P12107 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL11A1P12107 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.86■□□□□ 0.77
COL11A1P12107 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.86■□□□□ 0.77
COL11A1P12107 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
COL11A1P12107 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.85■□□□□ 0.77
COL11A1P12107 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
COL11A1P12107 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.85■□□□□ 0.77
COL11A1P12107 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.85■□□□□ 0.77
COL11A1P12107 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL11A1P12107 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.85■□□□□ 0.77
COL11A1P12107 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL11A1P12107 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL11A1P12107 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
COL11A1P12107 LYSMD4-203ENST00000378904 2122 ntBASIC19.85■□□□□ 0.77
COL11A1P12107 FAM58CP-201ENST00000435741 640 ntBASIC19.85■□□□□ 0.77
COL11A1P12107 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL11A1P12107 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.85■□□□□ 0.77
COL11A1P12107 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL11A1P12107 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.85■□□□□ 0.77
COL11A1P12107 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
COL11A1P12107 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.85■□□□□ 0.77
COL11A1P12107 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.85■□□□□ 0.77
COL11A1P12107 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.85■□□□□ 0.77
COL11A1P12107 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
COL11A1P12107 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.85■□□□□ 0.77
COL11A1P12107 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL11A1P12107 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL11A1P12107 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
COL11A1P12107 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL11A1P12107 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL11A1P12107 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL11A1P12107 AC092919.2-201ENST00000623631 1645 ntBASIC19.84■□□□□ 0.77
COL11A1P12107 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.84■□□□□ 0.77
COL11A1P12107 SLC25A6P2-201ENST00000497974 877 ntBASIC19.84■□□□□ 0.77
COL11A1P12107 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.84■□□□□ 0.77
COL11A1P12107 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.84■□□□□ 0.77
COL11A1P12107 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.84■□□□□ 0.77
COL11A1P12107 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.84■□□□□ 0.77
COL11A1P12107 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms