Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.55■□□□□ 0.56
RB1P06400 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.55■□□□□ 0.56
RB1P06400 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RB1P06400 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RB1P06400 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RB1P06400 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RB1P06400 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RB1P06400 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.54■□□□□ 0.56
RB1P06400 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RB1P06400 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RB1P06400 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.54■□□□□ 0.56
RB1P06400 FAM86GP-201ENST00000448322 971 ntBASIC18.54■□□□□ 0.56
RB1P06400 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.54■□□□□ 0.56
RB1P06400 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.54■□□□□ 0.56
RB1P06400 AC067863.1-201ENST00000494933 530 ntBASIC18.54■□□□□ 0.56
RB1P06400 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.54■□□□□ 0.56
RB1P06400 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.54■□□□□ 0.56
RB1P06400 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RB1P06400 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.54■□□□□ 0.56
RB1P06400 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.54■□□□□ 0.56
RB1P06400 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RB1P06400 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.54■□□□□ 0.56
RB1P06400 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RB1P06400 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
RB1P06400 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RB1P06400 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.54■□□□□ 0.56
RB1P06400 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RB1P06400 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RB1P06400 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.54■□□□□ 0.56
RB1P06400 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
RB1P06400 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RB1P06400 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RB1P06400 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RB1P06400 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RB1P06400 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RB1P06400 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RB1P06400 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RB1P06400 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RB1P06400 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.53■□□□□ 0.56
RB1P06400 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RB1P06400 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RB1P06400 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RB1P06400 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RB1P06400 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RB1P06400 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.53■□□□□ 0.56
RB1P06400 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RB1P06400 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.53■□□□□ 0.56
RB1P06400 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RB1P06400 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RB1P06400 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
RB1P06400 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.53■□□□□ 0.56
RB1P06400 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RB1P06400 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.53■□□□□ 0.56
RB1P06400 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.53■□□□□ 0.56
RB1P06400 RNA5SP421-201ENST00000516864 134 ntBASIC18.53■□□□□ 0.56
RB1P06400 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.53■□□□□ 0.56
RB1P06400 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RB1P06400 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.53■□□□□ 0.56
RB1P06400 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RB1P06400 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.53■□□□□ 0.56
RB1P06400 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RB1P06400 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.53■□□□□ 0.56
RB1P06400 AC138761.1-201ENST00000584393 385 ntBASIC18.53■□□□□ 0.56
RB1P06400 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.53■□□□□ 0.56
RB1P06400 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RB1P06400 AC005498.2-205ENST00000593218 784 ntBASIC18.53■□□□□ 0.56
RB1P06400 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
RB1P06400 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.53■□□□□ 0.56
RB1P06400 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.53■□□□□ 0.56
RB1P06400 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RB1P06400 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RB1P06400 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RB1P06400 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.53■□□□□ 0.56
RB1P06400 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RB1P06400 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.53■□□□□ 0.56
RB1P06400 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RB1P06400 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.52■□□□□ 0.56
RB1P06400 AL590787.1-201ENST00000568856 1315 ntBASIC18.52■□□□□ 0.56
RB1P06400 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RB1P06400 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.52■□□□□ 0.56
RB1P06400 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.52■□□□□ 0.56
RB1P06400 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RB1P06400 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RB1P06400 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
RB1P06400 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RB1P06400 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RB1P06400 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RB1P06400 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RB1P06400 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RB1P06400 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
RB1P06400 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.52■□□□□ 0.56
RB1P06400 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RB1P06400 MIR4745-201ENST00000577608 62 ntBASIC18.52■□□□□ 0.56
RB1P06400 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.52■□□□□ 0.56
RB1P06400 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.52■□□□□ 0.56
RB1P06400 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.52■□□□□ 0.56
RB1P06400 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RB1P06400 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.52■□□□□ 0.56
RB1P06400 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
RB1P06400 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms