Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD6O43541 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD6O43541 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
SMAD6O43541 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SMAD6O43541 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SMAD6O43541 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD6O43541 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD6O43541 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD6O43541 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.8■□□□□ 0.44
SMAD6O43541 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD6O43541 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.8■□□□□ 0.44
SMAD6O43541 IGHV3-52-201ENST00000519770 353 ntBASIC17.8■□□□□ 0.44
SMAD6O43541 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.8■□□□□ 0.44
SMAD6O43541 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.8■□□□□ 0.44
SMAD6O43541 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.8■□□□□ 0.44
SMAD6O43541 MIR7706-201ENST00000613747 67 ntBASIC17.8■□□□□ 0.44
SMAD6O43541 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SMAD6O43541 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD6O43541 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.8■□□□□ 0.44
SMAD6O43541 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SMAD6O43541 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SMAD6O43541 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD6O43541 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD6O43541 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SMAD6O43541 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD6O43541 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD6O43541 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD6O43541 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD6O43541 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SMAD6O43541 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD6O43541 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD6O43541 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD6O43541 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.79■□□□□ 0.44
SMAD6O43541 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.79■□□□□ 0.44
SMAD6O43541 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.79■□□□□ 0.44
SMAD6O43541 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD6O43541 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SMAD6O43541 AL355312.1-201ENST00000407115 2176 ntBASIC17.79■□□□□ 0.44
SMAD6O43541 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SMAD6O43541 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.79■□□□□ 0.44
SMAD6O43541 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD6O43541 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD6O43541 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD6O43541 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.79■□□□□ 0.44
SMAD6O43541 KLF4P1-201ENST00000412782 1185 ntBASIC17.79■□□□□ 0.44
SMAD6O43541 AL020989.1-201ENST00000422979 469 ntBASIC17.79■□□□□ 0.44
SMAD6O43541 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.79■□□□□ 0.44
SMAD6O43541 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.79■□□□□ 0.44
SMAD6O43541 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.79■□□□□ 0.44
SMAD6O43541 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.79■□□□□ 0.44
SMAD6O43541 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.79■□□□□ 0.44
SMAD6O43541 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.79■□□□□ 0.44
SMAD6O43541 AL022326.1-202ENST00000641533 845 ntBASIC17.79■□□□□ 0.44
SMAD6O43541 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD6O43541 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.79■□□□□ 0.44
SMAD6O43541 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD6O43541 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.79■□□□□ 0.44
SMAD6O43541 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD6O43541 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD6O43541 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD6O43541 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.79■□□□□ 0.44
SMAD6O43541 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.79■□□□□ 0.44
SMAD6O43541 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD6O43541 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SMAD6O43541 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.79■□□□□ 0.44
SMAD6O43541 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SMAD6O43541 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD6O43541 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD6O43541 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.79■□□□□ 0.44
SMAD6O43541 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD6O43541 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMAD6O43541 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMAD6O43541 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMAD6O43541 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMAD6O43541 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.78■□□□□ 0.44
SMAD6O43541 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMAD6O43541 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMAD6O43541 AC003669.1-201ENST00000334569 611 ntBASIC17.78■□□□□ 0.44
SMAD6O43541 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMAD6O43541 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.78■□□□□ 0.44
SMAD6O43541 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SMAD6O43541 AP000347.1-202ENST00000435868 847 ntBASIC17.78■□□□□ 0.44
SMAD6O43541 AC012640.2-201ENST00000561606 901 ntBASIC17.78■□□□□ 0.44
SMAD6O43541 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.78■□□□□ 0.44
SMAD6O43541 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.78■□□□□ 0.44
SMAD6O43541 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.78■□□□□ 0.44
SMAD6O43541 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SMAD6O43541 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMAD6O43541 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.78■□□□□ 0.44
SMAD6O43541 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMAD6O43541 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMAD6O43541 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SMAD6O43541 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.78■□□□□ 0.44
SMAD6O43541 AL133373.2-201ENST00000623187 2828 ntBASIC17.78■□□□□ 0.44
SMAD6O43541 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.78■□□□□ 0.44
SMAD6O43541 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
SMAD6O43541 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SMAD6O43541 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.78■□□□□ 0.44
SMAD6O43541 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.78■□□□□ 0.44
SMAD6O43541 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms