Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 AC140113.3-201ENST00000605663 199 ntBASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.76■□□□□ 0.43
TCRBV9S1A1TA0A576 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 SLC25A3P1-201ENST00000443844 931 ntBASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TCRBV9S1A1TA0A576 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV9S1A1TA0A576 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.74■□□□□ 0.43
TCRBV9S1A1TA0A576 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TCRBV9S1A1TA0A576 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.74■□□□□ 0.43
TCRBV9S1A1TA0A576 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV9S1A1TA0A576 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TCRBV9S1A1TA0A576 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TCRBV9S1A1TA0A576 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
TCRBV9S1A1TA0A576 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV9S1A1TA0A576 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV9S1A1TA0A576 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV9S1A1TA0A576 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
TCRBV9S1A1TA0A576 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TCRBV9S1A1TA0A576 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV9S1A1TA0A576 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.74■□□□□ 0.43
TCRBV9S1A1TA0A576 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TCRBV9S1A1TA0A576 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TCRBV9S1A1TA0A576 IGHGP-201ENST00000390555 1178 ntBASIC17.74■□□□□ 0.43
TCRBV9S1A1TA0A576 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV9S1A1TA0A576 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV9S1A1TA0A576 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.74■□□□□ 0.43
TCRBV9S1A1TA0A576 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV9S1A1TA0A576 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV9S1A1TA0A576 AC010203.1-204ENST00000548782 407 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms