Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.36■□□□□ 0.37
CCDC163A0A0D9SF12 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CCDC163A0A0D9SF12 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC163A0A0D9SF12 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC163A0A0D9SF12 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CCDC163A0A0D9SF12 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC163A0A0D9SF12 FAM86C2P-203ENST00000528684 1004 ntBASIC17.36■□□□□ 0.37
CCDC163A0A0D9SF12 MIR4745-201ENST00000577608 62 ntBASIC17.36■□□□□ 0.37
CCDC163A0A0D9SF12 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.36■□□□□ 0.37
CCDC163A0A0D9SF12 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC163A0A0D9SF12 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC163A0A0D9SF12 AC009093.7-201ENST00000623853 1223 ntBASIC17.36■□□□□ 0.37
CCDC163A0A0D9SF12 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC163A0A0D9SF12 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CCDC163A0A0D9SF12 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC163A0A0D9SF12 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC163A0A0D9SF12 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC163A0A0D9SF12 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCDC163A0A0D9SF12 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC163A0A0D9SF12 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC163A0A0D9SF12 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC163A0A0D9SF12 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC163A0A0D9SF12 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 AC073592.3-201ENST00000625118 1834 ntBASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 AC002056.1-201ENST00000395613 760 ntBASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 ADH5P3-201ENST00000433842 1137 ntBASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC163A0A0D9SF12 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 AL590787.1-201ENST00000568856 1315 ntBASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC163A0A0D9SF12 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC163A0A0D9SF12 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC163A0A0D9SF12 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC163A0A0D9SF12 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC163A0A0D9SF12 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CCDC163A0A0D9SF12 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms