Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
NINLQ9Y2I6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC24.05■■□□□ 1.44
NINLQ9Y2I6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NINLQ9Y2I6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NINLQ9Y2I6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC24.05■■□□□ 1.44
NINLQ9Y2I6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
NINLQ9Y2I6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC24.05■■□□□ 1.44
NINLQ9Y2I6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC24.05■■□□□ 1.44
NINLQ9Y2I6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
NINLQ9Y2I6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
NINLQ9Y2I6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
NINLQ9Y2I6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
NINLQ9Y2I6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NINLQ9Y2I6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NINLQ9Y2I6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
NINLQ9Y2I6 MIR940-201ENST00000401276 94 ntBASIC24.04■■□□□ 1.44
NINLQ9Y2I6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC24.04■■□□□ 1.44
NINLQ9Y2I6 AC239800.4-201ENST00000603712 296 ntBASIC24.04■■□□□ 1.44
NINLQ9Y2I6 AC008667.4-201ENST00000607370 168 ntBASIC24.04■■□□□ 1.44
NINLQ9Y2I6 LINC01451-201ENST00000623792 534 ntBASIC24.04■■□□□ 1.44
NINLQ9Y2I6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
NINLQ9Y2I6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
NINLQ9Y2I6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NINLQ9Y2I6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC24.04■■□□□ 1.44
NINLQ9Y2I6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NINLQ9Y2I6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
NINLQ9Y2I6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC24.04■■□□□ 1.44
NINLQ9Y2I6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NINLQ9Y2I6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NINLQ9Y2I6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
NINLQ9Y2I6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NINLQ9Y2I6 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC24.04■■□□□ 1.44
NINLQ9Y2I6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NINLQ9Y2I6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
NINLQ9Y2I6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
NINLQ9Y2I6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
NINLQ9Y2I6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC24.03■■□□□ 1.44
NINLQ9Y2I6 HS6ST1P1-201ENST00000481504 1234 ntBASIC24.03■■□□□ 1.44
NINLQ9Y2I6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC24.03■■□□□ 1.44
NINLQ9Y2I6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NINLQ9Y2I6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NINLQ9Y2I6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
NINLQ9Y2I6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC24.03■■□□□ 1.44
NINLQ9Y2I6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC24.03■■□□□ 1.44
NINLQ9Y2I6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC24.03■■□□□ 1.44
NINLQ9Y2I6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NINLQ9Y2I6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NINLQ9Y2I6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NINLQ9Y2I6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
NINLQ9Y2I6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
NINLQ9Y2I6 IGHV3-65-201ENST00000523210 341 ntBASIC24.03■■□□□ 1.44
NINLQ9Y2I6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
NINLQ9Y2I6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
NINLQ9Y2I6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC24.02■■□□□ 1.44
NINLQ9Y2I6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC24.02■■□□□ 1.44
NINLQ9Y2I6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NINLQ9Y2I6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC24.02■■□□□ 1.44
NINLQ9Y2I6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
NINLQ9Y2I6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NINLQ9Y2I6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC24.02■■□□□ 1.44
NINLQ9Y2I6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
NINLQ9Y2I6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
NINLQ9Y2I6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC24.02■■□□□ 1.44
NINLQ9Y2I6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
NINLQ9Y2I6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
NINLQ9Y2I6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC24.02■■□□□ 1.44
NINLQ9Y2I6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
NINLQ9Y2I6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
NINLQ9Y2I6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC24.02■■□□□ 1.44
NINLQ9Y2I6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC24.02■■□□□ 1.44
NINLQ9Y2I6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC24.02■■□□□ 1.44
NINLQ9Y2I6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC24.02■■□□□ 1.44
NINLQ9Y2I6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC24.02■■□□□ 1.44
NINLQ9Y2I6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC24.02■■□□□ 1.44
NINLQ9Y2I6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
NINLQ9Y2I6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
NINLQ9Y2I6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
NINLQ9Y2I6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC24.01■■□□□ 1.43
NINLQ9Y2I6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
NINLQ9Y2I6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC24.01■■□□□ 1.43
NINLQ9Y2I6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
NINLQ9Y2I6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NINLQ9Y2I6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
NINLQ9Y2I6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
NINLQ9Y2I6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NINLQ9Y2I6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
NINLQ9Y2I6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC24.01■■□□□ 1.43
NINLQ9Y2I6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC24.01■■□□□ 1.43
NINLQ9Y2I6 AC108073.2-201ENST00000464002 357 ntBASIC24.01■■□□□ 1.43
NINLQ9Y2I6 RPS15P9-201ENST00000494093 319 ntBASIC24.01■■□□□ 1.43
NINLQ9Y2I6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
NINLQ9Y2I6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC24.01■■□□□ 1.43
NINLQ9Y2I6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC24.01■■□□□ 1.43
NINLQ9Y2I6 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC24.01■■□□□ 1.43
NINLQ9Y2I6 AC079781.4-201ENST00000641908 219 ntBASIC24.01■■□□□ 1.43
NINLQ9Y2I6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
NINLQ9Y2I6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
NINLQ9Y2I6 AC006116.8-202ENST00000587620 1550 ntBASIC24.01■■□□□ 1.43
NINLQ9Y2I6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
NINLQ9Y2I6 LINC00304-203ENST00000565008 1864 ntBASIC24■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms