Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF6Q9Y252 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF6Q9Y252 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF6Q9Y252 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF6Q9Y252 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF6Q9Y252 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
RNF6Q9Y252 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RNF6Q9Y252 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF6Q9Y252 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RNF6Q9Y252 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF6Q9Y252 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF6Q9Y252 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF6Q9Y252 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF6Q9Y252 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RNF6Q9Y252 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RNF6Q9Y252 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF6Q9Y252 MCCD1P1-208ENST00000445732 328 ntBASIC16.67■□□□□ 0.26
RNF6Q9Y252 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.67■□□□□ 0.26
RNF6Q9Y252 MIR3180-5-201ENST00000583743 153 ntBASIC16.67■□□□□ 0.26
RNF6Q9Y252 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.67■□□□□ 0.26
RNF6Q9Y252 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.67■□□□□ 0.26
RNF6Q9Y252 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF6Q9Y252 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF6Q9Y252 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF6Q9Y252 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF6Q9Y252 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RNF6Q9Y252 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RNF6Q9Y252 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RNF6Q9Y252 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF6Q9Y252 AC011676.5-201ENST00000624864 2660 ntBASIC16.66■□□□□ 0.26
RNF6Q9Y252 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF6Q9Y252 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF6Q9Y252 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF6Q9Y252 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RNF6Q9Y252 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF6Q9Y252 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF6Q9Y252 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF6Q9Y252 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF6Q9Y252 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF6Q9Y252 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF6Q9Y252 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF6Q9Y252 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF6Q9Y252 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.66■□□□□ 0.26
RNF6Q9Y252 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF6Q9Y252 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.66■□□□□ 0.26
RNF6Q9Y252 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RNF6Q9Y252 BX276092.5-203ENST00000456199 560 ntBASIC16.66■□□□□ 0.26
RNF6Q9Y252 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.66■□□□□ 0.26
RNF6Q9Y252 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF6Q9Y252 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF6Q9Y252 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF6Q9Y252 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.66■□□□□ 0.26
RNF6Q9Y252 MIR3652-201ENST00000579335 131 ntBASIC16.66■□□□□ 0.26
RNF6Q9Y252 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.66■□□□□ 0.26
RNF6Q9Y252 AC011498.5-201ENST00000592027 486 ntBASIC16.66■□□□□ 0.26
RNF6Q9Y252 AC092329.2-201ENST00000598402 547 ntBASIC16.66■□□□□ 0.26
RNF6Q9Y252 AL121672.3-201ENST00000608644 468 ntBASIC16.66■□□□□ 0.26
RNF6Q9Y252 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF6Q9Y252 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF6Q9Y252 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF6Q9Y252 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RNF6Q9Y252 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF6Q9Y252 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF6Q9Y252 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF6Q9Y252 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF6Q9Y252 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RNF6Q9Y252 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RNF6Q9Y252 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF6Q9Y252 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF6Q9Y252 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RNF6Q9Y252 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF6Q9Y252 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF6Q9Y252 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF6Q9Y252 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RNF6Q9Y252 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms