Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 KRT18P22-201ENST00000402024 1347 ntBASIC18■□□□□ 0.47
CHMP2BQ9UQN3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 DET1-205ENST00000558413 583 ntTSL 4 BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 AL136038.4-201ENST00000603606 1261 ntBASIC18■□□□□ 0.47
CHMP2BQ9UQN3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 KRT89P-201ENST00000620027 1478 ntBASIC18■□□□□ 0.47
CHMP2BQ9UQN3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18■□□□□ 0.47
CHMP2BQ9UQN3 AL391807.1-203ENST00000604392 2365 ntBASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 RASA4DP-201ENST00000460726 1199 ntBASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 AC004263.2-201ENST00000617183 678 ntBASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 AL138966.2-201ENST00000621997 464 ntBASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms