Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
VTI1BQ9UEU0 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.41■□□□□ 0.38
VTI1BQ9UEU0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VTI1BQ9UEU0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.41■□□□□ 0.38
VTI1BQ9UEU0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.41■□□□□ 0.38
VTI1BQ9UEU0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.41■□□□□ 0.38
VTI1BQ9UEU0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VTI1BQ9UEU0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.41■□□□□ 0.38
VTI1BQ9UEU0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.41■□□□□ 0.38
VTI1BQ9UEU0 AC011558.1-201ENST00000623459 338 ntBASIC17.41■□□□□ 0.38
VTI1BQ9UEU0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.41■□□□□ 0.38
VTI1BQ9UEU0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VTI1BQ9UEU0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
VTI1BQ9UEU0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VTI1BQ9UEU0 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VTI1BQ9UEU0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VTI1BQ9UEU0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VTI1BQ9UEU0 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VTI1BQ9UEU0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.41■□□□□ 0.38
VTI1BQ9UEU0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
VTI1BQ9UEU0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
VTI1BQ9UEU0 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
VTI1BQ9UEU0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 LINC00167-201ENST00000530583 1419 ntBASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 AK4P3-201ENST00000418260 669 ntBASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
VTI1BQ9UEU0 AL118508.1-201ENST00000613502 2345 ntBASIC17.39■□□□□ 0.38
VTI1BQ9UEU0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
VTI1BQ9UEU0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.39■□□□□ 0.38
VTI1BQ9UEU0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTI1BQ9UEU0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.39■□□□□ 0.37
VTI1BQ9UEU0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.39■□□□□ 0.37
VTI1BQ9UEU0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
VTI1BQ9UEU0 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VTI1BQ9UEU0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTI1BQ9UEU0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VTI1BQ9UEU0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.39■□□□□ 0.37
VTI1BQ9UEU0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
VTI1BQ9UEU0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTI1BQ9UEU0 RNF152P1-201ENST00000397754 604 ntBASIC17.39■□□□□ 0.37
VTI1BQ9UEU0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
VTI1BQ9UEU0 DDX43P3-201ENST00000441064 443 ntBASIC17.39■□□□□ 0.37
VTI1BQ9UEU0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
VTI1BQ9UEU0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
VTI1BQ9UEU0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.39■□□□□ 0.37
VTI1BQ9UEU0 AL023973.1-201ENST00000624619 620 ntBASIC17.39■□□□□ 0.37
VTI1BQ9UEU0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.39■□□□□ 0.37
VTI1BQ9UEU0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTI1BQ9UEU0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTI1BQ9UEU0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VTI1BQ9UEU0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTI1BQ9UEU0 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTI1BQ9UEU0 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTI1BQ9UEU0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VTI1BQ9UEU0 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VTI1BQ9UEU0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
VTI1BQ9UEU0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VTI1BQ9UEU0 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
VTI1BQ9UEU0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VTI1BQ9UEU0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VTI1BQ9UEU0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VTI1BQ9UEU0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VTI1BQ9UEU0 OR6D1P-203ENST00000641209 4860 ntBASIC17.38■□□□□ 0.37
VTI1BQ9UEU0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.38■□□□□ 0.37
VTI1BQ9UEU0 TSPY5P-201ENST00000426936 936 ntBASIC17.38■□□□□ 0.37
VTI1BQ9UEU0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
VTI1BQ9UEU0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.38■□□□□ 0.37
VTI1BQ9UEU0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VTI1BQ9UEU0 AL441883.1-201ENST00000566170 1045 ntBASIC17.38■□□□□ 0.37
VTI1BQ9UEU0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VTI1BQ9UEU0 AC024243.1-201ENST00000609234 778 ntBASIC17.38■□□□□ 0.37
VTI1BQ9UEU0 REXO1L11P-201ENST00000620964 1927 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms