Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 BX088651.1-201ENST00000540551 451 ntBASIC20.28■□□□□ 0.84
LMBRD1Q9NUN5 AC024243.1-201ENST00000609234 778 ntBASIC20.28■□□□□ 0.84
LMBRD1Q9NUN5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
LMBRD1Q9NUN5 AC113410.3-201ENST00000623366 203 ntBASIC20.28■□□□□ 0.84
LMBRD1Q9NUN5 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.28■□□□□ 0.84
LMBRD1Q9NUN5 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LMBRD1Q9NUN5 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.28■□□□□ 0.84
LMBRD1Q9NUN5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.28■□□□□ 0.84
LMBRD1Q9NUN5 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LMBRD1Q9NUN5 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LMBRD1Q9NUN5 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LMBRD1Q9NUN5 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LMBRD1Q9NUN5 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LMBRD1Q9NUN5 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 MIR935-201ENST00000401179 91 ntBASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 KRT18P65-201ENST00000439811 1286 ntBASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 FAM197Y4-202ENST00000622692 608 ntBASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
LMBRD1Q9NUN5 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC20.27■□□□□ 0.83
LMBRD1Q9NUN5 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.27■□□□□ 0.83
LMBRD1Q9NUN5 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
LMBRD1Q9NUN5 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.27■□□□□ 0.83
LMBRD1Q9NUN5 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 ABHD17AP1-201ENST00000358206 933 ntBASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 MIR3917-201ENST00000580971 93 ntBASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LMBRD1Q9NUN5 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LMBRD1Q9NUN5 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LMBRD1Q9NUN5 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LMBRD1Q9NUN5 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LMBRD1Q9NUN5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LMBRD1Q9NUN5 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.25■□□□□ 0.83
LMBRD1Q9NUN5 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LMBRD1Q9NUN5 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LMBRD1Q9NUN5 PVRIG2P-201ENST00000435460 978 ntBASIC20.25■□□□□ 0.83
LMBRD1Q9NUN5 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.25■□□□□ 0.83
LMBRD1Q9NUN5 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
LMBRD1Q9NUN5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.25■□□□□ 0.83
LMBRD1Q9NUN5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.25■□□□□ 0.83
LMBRD1Q9NUN5 MIR4651-201ENST00000582622 73 ntBASIC20.25■□□□□ 0.83
LMBRD1Q9NUN5 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.25■□□□□ 0.83
LMBRD1Q9NUN5 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LMBRD1Q9NUN5 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LMBRD1Q9NUN5 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LMBRD1Q9NUN5 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LMBRD1Q9NUN5 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LMBRD1Q9NUN5 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LMBRD1Q9NUN5 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LMBRD1Q9NUN5 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.24■□□□□ 0.83
LMBRD1Q9NUN5 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
LMBRD1Q9NUN5 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms