Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXP3Q9BZS1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.27■□□□□ 0.51
FOXP3Q9BZS1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.27■□□□□ 0.51
FOXP3Q9BZS1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXP3Q9BZS1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXP3Q9BZS1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 NEK4P2-201ENST00000580004 1012 ntBASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 AC069148.1-201ENST00000608741 768 ntBASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 AC084018.2-201ENST00000613093 2607 ntBASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.26■□□□□ 0.51
FOXP3Q9BZS1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 SPDYE15P-201ENST00000424157 909 ntBASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 DUSP5P1-201ENST00000441325 1139 ntBASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 SEC1P-202ENST00000473944 940 ntBASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 ZNF444P1-201ENST00000559497 298 ntBASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXP3Q9BZS1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 LINC01311-201ENST00000565162 1445 ntBASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 STARP1-201ENST00000397973 869 ntBASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 AC113404.2-201ENST00000507884 177 ntBASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 AL136038.3-201ENST00000561909 1096 ntBASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms