Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 AC022211.2-201ENST00000585075 2527 ntBASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 AC010947.1-201ENST00000623454 693 ntBASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.4■□□□□ 0.06
FOXRED1Q96CU9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 LINC00167-201ENST00000530583 1419 ntBASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 KRT8P9-201ENST00000558927 1449 ntBASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 AC016396.2-201ENST00000562575 1417 ntBASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXRED1Q96CU9 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
FOXRED1Q96CU9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.38■□□□□ 0.05
FOXRED1Q96CU9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXRED1Q96CU9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.38■□□□□ 0.05
FOXRED1Q96CU9 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXRED1Q96CU9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.38■□□□□ 0.05
FOXRED1Q96CU9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.38■□□□□ 0.05
FOXRED1Q96CU9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.38■□□□□ 0.05
FOXRED1Q96CU9 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXRED1Q96CU9 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXRED1Q96CU9 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.38■□□□□ 0.05
FOXRED1Q96CU9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
FOXRED1Q96CU9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FOXRED1Q96CU9 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXRED1Q96CU9 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FOXRED1Q96CU9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms