Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SMARCC1Q92922 CYB561-216ENST00000582297 897 ntTSL 3 BASIC22.44■■□□□ 1.18
SMARCC1Q92922 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC22.44■■□□□ 1.18
SMARCC1Q92922 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC22.44■■□□□ 1.18
SMARCC1Q92922 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
SMARCC1Q92922 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
SMARCC1Q92922 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SMARCC1Q92922 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SMARCC1Q92922 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
SMARCC1Q92922 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC22.43■■□□□ 1.18
SMARCC1Q92922 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC22.43■■□□□ 1.18
SMARCC1Q92922 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SMARCC1Q92922 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC22.43■■□□□ 1.18
SMARCC1Q92922 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SMARCC1Q92922 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC22.43■■□□□ 1.18
SMARCC1Q92922 AC005498.2-205ENST00000593218 784 ntBASIC22.43■■□□□ 1.18
SMARCC1Q92922 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC22.43■■□□□ 1.18
SMARCC1Q92922 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
SMARCC1Q92922 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC22.43■■□□□ 1.18
SMARCC1Q92922 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
SMARCC1Q92922 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SMARCC1Q92922 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC22.43■■□□□ 1.18
SMARCC1Q92922 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SMARCC1Q92922 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC22.43■■□□□ 1.18
SMARCC1Q92922 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SMARCC1Q92922 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC22.43■■□□□ 1.18
SMARCC1Q92922 AC009949.1-201ENST00000623048 1830 ntBASIC22.43■■□□□ 1.18
SMARCC1Q92922 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
SMARCC1Q92922 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SMARCC1Q92922 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SMARCC1Q92922 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMARCC1Q92922 AC006116.8-202ENST00000587620 1550 ntBASIC22.42■■□□□ 1.18
SMARCC1Q92922 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMARCC1Q92922 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SMARCC1Q92922 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC22.42■■□□□ 1.18
SMARCC1Q92922 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMARCC1Q92922 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMARCC1Q92922 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMARCC1Q92922 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMARCC1Q92922 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMARCC1Q92922 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMARCC1Q92922 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMARCC1Q92922 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMARCC1Q92922 HLA-DRB6-201ENST00000411500 1235 ntBASIC22.42■■□□□ 1.18
SMARCC1Q92922 FAM86GP-201ENST00000448322 971 ntBASIC22.42■■□□□ 1.18
SMARCC1Q92922 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC22.42■■□□□ 1.18
SMARCC1Q92922 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC22.42■■□□□ 1.18
SMARCC1Q92922 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC22.42■■□□□ 1.18
SMARCC1Q92922 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
SMARCC1Q92922 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMARCC1Q92922 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
SMARCC1Q92922 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC22.42■■□□□ 1.18
SMARCC1Q92922 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.42■■□□□ 1.18
SMARCC1Q92922 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC22.42■■□□□ 1.18
SMARCC1Q92922 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMARCC1Q92922 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMARCC1Q92922 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC22.41■■□□□ 1.18
SMARCC1Q92922 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC22.41■■□□□ 1.18
SMARCC1Q92922 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SMARCC1Q92922 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMARCC1Q92922 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC22.41■■□□□ 1.18
SMARCC1Q92922 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SMARCC1Q92922 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC22.41■■□□□ 1.18
SMARCC1Q92922 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SMARCC1Q92922 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC22.41■■□□□ 1.18
SMARCC1Q92922 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMARCC1Q92922 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
SMARCC1Q92922 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMARCC1Q92922 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMARCC1Q92922 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
SMARCC1Q92922 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SMARCC1Q92922 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMARCC1Q92922 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC22.41■■□□□ 1.18
SMARCC1Q92922 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMARCC1Q92922 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC22.41■■□□□ 1.18
SMARCC1Q92922 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC22.41■■□□□ 1.18
SMARCC1Q92922 INO80C-206ENST00000586489 594 ntTSL 3 BASIC22.41■■□□□ 1.18
SMARCC1Q92922 AC015911.4-201ENST00000588022 1070 ntBASIC22.41■■□□□ 1.18
SMARCC1Q92922 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC22.41■■□□□ 1.18
SMARCC1Q92922 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC22.41■■□□□ 1.18
SMARCC1Q92922 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
SMARCC1Q92922 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC22.41■■□□□ 1.18
SMARCC1Q92922 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC22.41■■□□□ 1.18
SMARCC1Q92922 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC22.41■■□□□ 1.18
SMARCC1Q92922 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC22.41■■□□□ 1.18
SMARCC1Q92922 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SMARCC1Q92922 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.4■■□□□ 1.18
SMARCC1Q92922 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SMARCC1Q92922 AC100803.2-201ENST00000562459 1963 ntBASIC22.4■■□□□ 1.18
SMARCC1Q92922 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.4■■□□□ 1.18
SMARCC1Q92922 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SMARCC1Q92922 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
SMARCC1Q92922 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
SMARCC1Q92922 ADH5P3-201ENST00000433842 1137 ntBASIC22.4■■□□□ 1.18
SMARCC1Q92922 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC22.4■■□□□ 1.18
SMARCC1Q92922 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC22.4■■□□□ 1.18
SMARCC1Q92922 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
SMARCC1Q92922 DUT-210ENST00000559935 569 ntTSL 3 BASIC22.4■■□□□ 1.18
SMARCC1Q92922 IGHV3OR16-6-201ENST00000568775 360 ntBASIC22.4■■□□□ 1.18
SMARCC1Q92922 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms