Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
XRN1Q8IZH2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
XRN1Q8IZH2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
XRN1Q8IZH2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
XRN1Q8IZH2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC24.27■■□□□ 1.48
XRN1Q8IZH2 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC24.27■■□□□ 1.48
XRN1Q8IZH2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
XRN1Q8IZH2 AC116407.2-201ENST00000613639 860 ntBASIC24.27■■□□□ 1.48
XRN1Q8IZH2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC24.27■■□□□ 1.48
XRN1Q8IZH2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC24.27■■□□□ 1.48
XRN1Q8IZH2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
XRN1Q8IZH2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
XRN1Q8IZH2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
XRN1Q8IZH2 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
XRN1Q8IZH2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
XRN1Q8IZH2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC24.27■■□□□ 1.48
XRN1Q8IZH2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC24.27■■□□□ 1.48
XRN1Q8IZH2 RARRES2P8-201ENST00000566335 367 ntBASIC24.27■■□□□ 1.48
XRN1Q8IZH2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC24.27■■□□□ 1.48
XRN1Q8IZH2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
XRN1Q8IZH2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
XRN1Q8IZH2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
XRN1Q8IZH2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
XRN1Q8IZH2 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC24.26■■□□□ 1.47
XRN1Q8IZH2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
XRN1Q8IZH2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
XRN1Q8IZH2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC24.26■■□□□ 1.47
XRN1Q8IZH2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
XRN1Q8IZH2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
XRN1Q8IZH2 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
XRN1Q8IZH2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
XRN1Q8IZH2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC24.26■■□□□ 1.47
XRN1Q8IZH2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
XRN1Q8IZH2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC24.26■■□□□ 1.47
XRN1Q8IZH2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC24.26■■□□□ 1.47
XRN1Q8IZH2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
XRN1Q8IZH2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
XRN1Q8IZH2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
XRN1Q8IZH2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
XRN1Q8IZH2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC24.26■■□□□ 1.47
XRN1Q8IZH2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
XRN1Q8IZH2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
XRN1Q8IZH2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC24.25■■□□□ 1.47
XRN1Q8IZH2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
XRN1Q8IZH2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC24.25■■□□□ 1.47
XRN1Q8IZH2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
XRN1Q8IZH2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC24.25■■□□□ 1.47
XRN1Q8IZH2 AC055876.3-201ENST00000431496 288 ntBASIC24.25■■□□□ 1.47
XRN1Q8IZH2 SPDYE14P-201ENST00000442619 822 ntBASIC24.25■■□□□ 1.47
XRN1Q8IZH2 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC24.25■■□□□ 1.47
XRN1Q8IZH2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
XRN1Q8IZH2 AC138649.4-201ENST00000612222 287 ntBASIC24.25■■□□□ 1.47
XRN1Q8IZH2 BSG-214ENST00000614867 960 ntTSL 3 BASIC24.25■■□□□ 1.47
XRN1Q8IZH2 SLC25A24-204ENST00000569674 2357 ntBASIC24.25■■□□□ 1.47
XRN1Q8IZH2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
XRN1Q8IZH2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
XRN1Q8IZH2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
XRN1Q8IZH2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC24.25■■□□□ 1.47
XRN1Q8IZH2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
XRN1Q8IZH2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
XRN1Q8IZH2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC24.24■■□□□ 1.47
XRN1Q8IZH2 MEIS3P1-201ENST00000495167 958 ntBASIC24.24■■□□□ 1.47
XRN1Q8IZH2 RNA5SP421-201ENST00000516864 134 ntBASIC24.24■■□□□ 1.47
XRN1Q8IZH2 AC243562.1-201ENST00000560672 389 ntBASIC24.24■■□□□ 1.47
XRN1Q8IZH2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
XRN1Q8IZH2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
XRN1Q8IZH2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC24.24■■□□□ 1.47
XRN1Q8IZH2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC24.24■■□□□ 1.47
XRN1Q8IZH2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
XRN1Q8IZH2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
XRN1Q8IZH2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC24.24■■□□□ 1.47
XRN1Q8IZH2 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC24.24■■□□□ 1.47
XRN1Q8IZH2 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC24.24■■□□□ 1.47
XRN1Q8IZH2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
XRN1Q8IZH2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
XRN1Q8IZH2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC24.24■■□□□ 1.47
XRN1Q8IZH2 AC125807.1-201ENST00000483097 614 ntBASIC24.24■■□□□ 1.47
XRN1Q8IZH2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC24.24■■□□□ 1.47
XRN1Q8IZH2 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC24.24■■□□□ 1.47
XRN1Q8IZH2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
XRN1Q8IZH2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
XRN1Q8IZH2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
XRN1Q8IZH2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
XRN1Q8IZH2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
XRN1Q8IZH2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
XRN1Q8IZH2 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC24.23■■□□□ 1.47
XRN1Q8IZH2 AC129492.6-201ENST00000611383 1305 ntBASIC24.23■■□□□ 1.47
XRN1Q8IZH2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
XRN1Q8IZH2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC24.23■■□□□ 1.47
XRN1Q8IZH2 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
XRN1Q8IZH2 AC007274.1-201ENST00000439805 662 ntBASIC24.23■■□□□ 1.47
XRN1Q8IZH2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
XRN1Q8IZH2 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC24.23■■□□□ 1.47
XRN1Q8IZH2 AC140878.1-201ENST00000565277 250 ntBASIC24.23■■□□□ 1.47
XRN1Q8IZH2 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
XRN1Q8IZH2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
XRN1Q8IZH2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC24.23■■□□□ 1.47
XRN1Q8IZH2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC24.23■■□□□ 1.47
XRN1Q8IZH2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC24.23■■□□□ 1.47
XRN1Q8IZH2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms