Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RNF135Q8IUD6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF135Q8IUD6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF135Q8IUD6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF135Q8IUD6 AP002472.1-201ENST00000577490 586 ntBASIC18.73■□□□□ 0.59
RNF135Q8IUD6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
RNF135Q8IUD6 NKAPP1-205ENST00000585790 367 ntBASIC18.73■□□□□ 0.59
RNF135Q8IUD6 AC106028.4-201ENST00000614509 607 ntBASIC18.73■□□□□ 0.59
RNF135Q8IUD6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
RNF135Q8IUD6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RNF135Q8IUD6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
RNF135Q8IUD6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF135Q8IUD6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF135Q8IUD6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF135Q8IUD6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.73■□□□□ 0.59
RNF135Q8IUD6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF135Q8IUD6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF135Q8IUD6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF135Q8IUD6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 AC113404.2-201ENST00000507884 177 ntBASIC18.72■□□□□ 0.59
RNF135Q8IUD6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 AC090164.3-201ENST00000610780 2143 ntBASIC18.72■□□□□ 0.59
RNF135Q8IUD6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RNF135Q8IUD6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF135Q8IUD6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF135Q8IUD6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF135Q8IUD6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF135Q8IUD6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
RNF135Q8IUD6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF135Q8IUD6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF135Q8IUD6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF135Q8IUD6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.71■□□□□ 0.59
RNF135Q8IUD6 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
RNF135Q8IUD6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.71■□□□□ 0.59
RNF135Q8IUD6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF135Q8IUD6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF135Q8IUD6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RNF135Q8IUD6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF135Q8IUD6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RNF135Q8IUD6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF135Q8IUD6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF135Q8IUD6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF135Q8IUD6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF135Q8IUD6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF135Q8IUD6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RNF135Q8IUD6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RNF135Q8IUD6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.71■□□□□ 0.58
RNF135Q8IUD6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF135Q8IUD6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RNF135Q8IUD6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF135Q8IUD6 AL163051.1-201ENST00000569214 1512 ntBASIC18.7■□□□□ 0.58
RNF135Q8IUD6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF135Q8IUD6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF135Q8IUD6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF135Q8IUD6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RNF135Q8IUD6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF135Q8IUD6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RNF135Q8IUD6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF135Q8IUD6 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF135Q8IUD6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF135Q8IUD6 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF135Q8IUD6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF135Q8IUD6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF135Q8IUD6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF135Q8IUD6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RNF135Q8IUD6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
RNF135Q8IUD6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF135Q8IUD6 CNN2P11-201ENST00000429351 262 ntBASIC18.7■□□□□ 0.58
RNF135Q8IUD6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF135Q8IUD6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.7■□□□□ 0.58
RNF135Q8IUD6 KRT18P41-201ENST00000518924 1277 ntBASIC18.7■□□□□ 0.58
RNF135Q8IUD6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF135Q8IUD6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF135Q8IUD6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms