Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF220Q5VTB9 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF220Q5VTB9 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF220Q5VTB9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF220Q5VTB9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF220Q5VTB9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RNF220Q5VTB9 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF220Q5VTB9 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF220Q5VTB9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF220Q5VTB9 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF220Q5VTB9 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.07■□□□□ 0.32
RNF220Q5VTB9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF220Q5VTB9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF220Q5VTB9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF220Q5VTB9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF220Q5VTB9 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RNF220Q5VTB9 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF220Q5VTB9 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF220Q5VTB9 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF220Q5VTB9 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF220Q5VTB9 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF220Q5VTB9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF220Q5VTB9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF220Q5VTB9 TMEM191A-211ENST00000637163 1067 ntBASIC17.07■□□□□ 0.32
RNF220Q5VTB9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF220Q5VTB9 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF220Q5VTB9 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF220Q5VTB9 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF220Q5VTB9 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF220Q5VTB9 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 MIR4674-201ENST00000582457 87 ntBASIC17.06■□□□□ 0.32
RNF220Q5VTB9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 AL023803.3-201ENST00000615559 522 ntBASIC17.06■□□□□ 0.32
RNF220Q5VTB9 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF220Q5VTB9 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 AC007950.2-201ENST00000615045 2347 ntBASIC17.05■□□□□ 0.32
RNF220Q5VTB9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 TSPY7P-201ENST00000431358 1114 ntBASIC17.05■□□□□ 0.32
RNF220Q5VTB9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms