Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNRPEP62304 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SNRPEP62304 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNRPEP62304 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC13.54□□□□□ -0.24
SNRPEP62304 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC13.54□□□□□ -0.24
SNRPEP62304 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC13.54□□□□□ -0.24
SNRPEP62304 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SNRPEP62304 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNRPEP62304 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.54□□□□□ -0.24
SNRPEP62304 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.54□□□□□ -0.24
SNRPEP62304 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC13.54□□□□□ -0.24
SNRPEP62304 OR2I1P-210ENST00000642037 4691 ntBASIC13.54□□□□□ -0.24
SNRPEP62304 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SNRPEP62304 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNRPEP62304 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNRPEP62304 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SNRPEP62304 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.54□□□□□ -0.24
SNRPEP62304 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNRPEP62304 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC13.54□□□□□ -0.24
SNRPEP62304 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNRPEP62304 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SNRPEP62304 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 AC005840.4-201ENST00000541242 2494 ntBASIC13.53□□□□□ -0.24
SNRPEP62304 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.53□□□□□ -0.24
SNRPEP62304 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.53□□□□□ -0.24
SNRPEP62304 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SNRPEP62304 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SNRPEP62304 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 MIR639-201ENST00000384974 98 ntBASIC13.53□□□□□ -0.24
SNRPEP62304 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC13.53□□□□□ -0.24
SNRPEP62304 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.53□□□□□ -0.24
SNRPEP62304 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.53□□□□□ -0.24
SNRPEP62304 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.53□□□□□ -0.24
SNRPEP62304 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC13.53□□□□□ -0.24
SNRPEP62304 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC13.53□□□□□ -0.24
SNRPEP62304 BHLHE23-202ENST00000612929 1109 ntBASIC13.53□□□□□ -0.24
SNRPEP62304 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC13.53□□□□□ -0.24
SNRPEP62304 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 AC005252.3-201ENST00000623855 2258 ntBASIC13.53□□□□□ -0.24
SNRPEP62304 KRT8P45-201ENST00000414328 1447 ntBASIC13.53□□□□□ -0.24
SNRPEP62304 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SNRPEP62304 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.53□□□□□ -0.24
SNRPEP62304 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.53□□□□□ -0.24
SNRPEP62304 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNRPEP62304 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC13.53□□□□□ -0.24
SNRPEP62304 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SNRPEP62304 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.52□□□□□ -0.24
SNRPEP62304 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SNRPEP62304 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
SNRPEP62304 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.52□□□□□ -0.24
SNRPEP62304 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.52□□□□□ -0.24
SNRPEP62304 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SNRPEP62304 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
SNRPEP62304 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
SNRPEP62304 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SNRPEP62304 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SNRPEP62304 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SNRPEP62304 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SNRPEP62304 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SNRPEP62304 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SNRPEP62304 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
SNRPEP62304 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SNRPEP62304 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
SNRPEP62304 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
SNRPEP62304 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SNRPEP62304 HES6-204ENST00000409182 863 ntTSL 2 BASIC13.52□□□□□ -0.25
SNRPEP62304 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC13.52□□□□□ -0.25
SNRPEP62304 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC13.52□□□□□ -0.25
SNRPEP62304 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC13.52□□□□□ -0.25
SNRPEP62304 RNF126P1-201ENST00000567452 1320 ntBASIC13.52□□□□□ -0.25
SNRPEP62304 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNRPEP62304 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC13.52□□□□□ -0.25
SNRPEP62304 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNRPEP62304 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms