Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.21■□□□□ 0.02
AP3S2P59780 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.2■□□□□ 0.02
AP3S2P59780 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S2P59780 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S2P59780 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S2P59780 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
AP3S2P59780 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S2P59780 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S2P59780 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.2■□□□□ 0.02
AP3S2P59780 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S2P59780 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
AP3S2P59780 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
AP3S2P59780 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S2P59780 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.2■□□□□ 0.02
AP3S2P59780 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
AP3S2P59780 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S2P59780 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S2P59780 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S2P59780 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.2■□□□□ 0.02
AP3S2P59780 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.2■□□□□ 0.02
AP3S2P59780 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.2■□□□□ 0.02
AP3S2P59780 AL050303.2-201ENST00000619798 666 ntBASIC15.2■□□□□ 0.02
AP3S2P59780 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
AP3S2P59780 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.2■□□□□ 0.02
AP3S2P59780 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
AP3S2P59780 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
AP3S2P59780 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S2P59780 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S2P59780 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S2P59780 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S2P59780 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S2P59780 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
AP3S2P59780 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S2P59780 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
AP3S2P59780 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S2P59780 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S2P59780 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
AP3S2P59780 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S2P59780 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S2P59780 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S2P59780 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S2P59780 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S2P59780 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S2P59780 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
AP3S2P59780 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S2P59780 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S2P59780 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S2P59780 AL596257.1-201ENST00000641463 2694 ntBASIC15.19■□□□□ 0.02
AP3S2P59780 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S2P59780 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S2P59780 AC004980.1-204ENST00000429707 299 ntBASIC15.19■□□□□ 0.02
AP3S2P59780 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.19■□□□□ 0.02
AP3S2P59780 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15.19■□□□□ 0.02
AP3S2P59780 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
AP3S2P59780 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.19■□□□□ 0.02
AP3S2P59780 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S2P59780 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.19■□□□□ 0.02
AP3S2P59780 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S2P59780 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S2P59780 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S2P59780 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.19■□□□□ 0.02
AP3S2P59780 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S2P59780 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S2P59780 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S2P59780 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.19■□□□□ 0.02
AP3S2P59780 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S2P59780 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.19■□□□□ 0.02
AP3S2P59780 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S2P59780 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.19■□□□□ 0.02
AP3S2P59780 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.19■□□□□ 0.02
AP3S2P59780 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S2P59780 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S2P59780 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
AP3S2P59780 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S2P59780 GPAT2P1-201ENST00000444924 1672 ntBASIC15.19■□□□□ 0.02
AP3S2P59780 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S2P59780 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
AP3S2P59780 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.18■□□□□ 0.02
AP3S2P59780 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S2P59780 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S2P59780 MST1L-201ENST00000442552 2185 ntBASIC15.18■□□□□ 0.02
AP3S2P59780 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
AP3S2P59780 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S2P59780 NORAD-201ENST00000565493 5339 ntBASIC15.18■□□□□ 0.02
AP3S2P59780 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC15.18■□□□□ 0.02
AP3S2P59780 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S2P59780 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S2P59780 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.18■□□□□ 0.02
AP3S2P59780 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.18■□□□□ 0.02
AP3S2P59780 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
AP3S2P59780 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.18■□□□□ 0.02
AP3S2P59780 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.18■□□□□ 0.02
AP3S2P59780 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.18■□□□□ 0.02
AP3S2P59780 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S2P59780 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S2P59780 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
AP3S2P59780 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
AP3S2P59780 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S2P59780 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.18■□□□□ 0.02
AP3S2P59780 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms