Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
KCNQ4P56696 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
KCNQ4P56696 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNQ4P56696 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNQ4P56696 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNQ4P56696 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC22.35■■□□□ 1.17
KCNQ4P56696 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
KCNQ4P56696 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
KCNQ4P56696 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNQ4P56696 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
KCNQ4P56696 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC22.35■■□□□ 1.17
KCNQ4P56696 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC22.35■■□□□ 1.17
KCNQ4P56696 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC22.35■■□□□ 1.17
KCNQ4P56696 AC005237.2-201ENST00000434368 219 ntBASIC22.35■■□□□ 1.17
KCNQ4P56696 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC22.35■■□□□ 1.17
KCNQ4P56696 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC22.35■■□□□ 1.17
KCNQ4P56696 AC005225.4-201ENST00000557330 545 ntBASIC22.35■■□□□ 1.17
KCNQ4P56696 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC22.35■■□□□ 1.17
KCNQ4P56696 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
KCNQ4P56696 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC22.35■■□□□ 1.17
KCNQ4P56696 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
KCNQ4P56696 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
KCNQ4P56696 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNQ4P56696 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC22.35■■□□□ 1.17
KCNQ4P56696 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNQ4P56696 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNQ4P56696 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
KCNQ4P56696 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNQ4P56696 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
KCNQ4P56696 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KCNQ4P56696 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC22.34■■□□□ 1.17
KCNQ4P56696 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
KCNQ4P56696 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
KCNQ4P56696 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KCNQ4P56696 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KCNQ4P56696 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
KCNQ4P56696 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC22.34■■□□□ 1.17
KCNQ4P56696 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
KCNQ4P56696 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC22.34■■□□□ 1.17
KCNQ4P56696 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC22.34■■□□□ 1.17
KCNQ4P56696 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC22.34■■□□□ 1.17
KCNQ4P56696 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC22.34■■□□□ 1.17
KCNQ4P56696 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC22.34■■□□□ 1.17
KCNQ4P56696 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC22.34■■□□□ 1.17
KCNQ4P56696 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC22.34■■□□□ 1.17
KCNQ4P56696 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC22.34■■□□□ 1.17
KCNQ4P56696 AC099522.2-201ENST00000607001 744 ntBASIC22.34■■□□□ 1.17
KCNQ4P56696 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC22.34■■□□□ 1.17
KCNQ4P56696 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KCNQ4P56696 AC073130.3-201ENST00000624389 2278 ntBASIC22.34■■□□□ 1.17
KCNQ4P56696 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KCNQ4P56696 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KCNQ4P56696 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
KCNQ4P56696 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC22.34■■□□□ 1.17
KCNQ4P56696 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC22.34■■□□□ 1.17
KCNQ4P56696 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC22.34■■□□□ 1.17
KCNQ4P56696 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
KCNQ4P56696 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC22.34■■□□□ 1.17
KCNQ4P56696 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KCNQ4P56696 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
KCNQ4P56696 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
KCNQ4P56696 AL590787.1-201ENST00000568856 1315 ntBASIC22.33■■□□□ 1.17
KCNQ4P56696 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
KCNQ4P56696 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
KCNQ4P56696 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC22.33■■□□□ 1.17
KCNQ4P56696 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
KCNQ4P56696 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC22.33■■□□□ 1.17
KCNQ4P56696 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
KCNQ4P56696 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
KCNQ4P56696 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
KCNQ4P56696 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
KCNQ4P56696 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
KCNQ4P56696 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
KCNQ4P56696 MIR943-201ENST00000401286 94 ntBASIC22.33■■□□□ 1.17
KCNQ4P56696 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC22.33■■□□□ 1.17
KCNQ4P56696 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC22.33■■□□□ 1.17
KCNQ4P56696 AC015911.4-201ENST00000588022 1070 ntBASIC22.33■■□□□ 1.17
KCNQ4P56696 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC22.33■■□□□ 1.17
KCNQ4P56696 AC026120.1-201ENST00000611536 926 ntBASIC22.33■■□□□ 1.17
KCNQ4P56696 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
KCNQ4P56696 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
KCNQ4P56696 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
KCNQ4P56696 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC22.33■■□□□ 1.17
KCNQ4P56696 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
KCNQ4P56696 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.16
KCNQ4P56696 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
KCNQ4P56696 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
KCNQ4P56696 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNQ4P56696 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
KCNQ4P56696 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNQ4P56696 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNQ4P56696 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
KCNQ4P56696 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC22.32■■□□□ 1.16
KCNQ4P56696 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNQ4P56696 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC22.32■■□□□ 1.16
KCNQ4P56696 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
KCNQ4P56696 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
KCNQ4P56696 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
KCNQ4P56696 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNQ4P56696 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms