Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC31.06■■■□□ 2.56
SMARCA2P51531 AC084121.4-201ENST00000641598 221 ntBASIC31.06■■■□□ 2.56
SMARCA2P51531 AF228730.8-201ENST00000642140 221 ntBASIC31.06■■■□□ 2.56
SMARCA2P51531 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
SMARCA2P51531 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
SMARCA2P51531 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC31.06■■■□□ 2.56
SMARCA2P51531 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SMARCA2P51531 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC31.06■■■□□ 2.56
SMARCA2P51531 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SMARCA2P51531 AC129492.6-201ENST00000611383 1305 ntBASIC31.06■■■□□ 2.56
SMARCA2P51531 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC31.06■■■□□ 2.56
SMARCA2P51531 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC31.06■■■□□ 2.56
SMARCA2P51531 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC31.06■■■□□ 2.56
SMARCA2P51531 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SMARCA2P51531 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SMARCA2P51531 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SMARCA2P51531 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
SMARCA2P51531 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SMARCA2P51531 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SMARCA2P51531 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC31.05■■■□□ 2.56
SMARCA2P51531 AL645728.2-201ENST00000641974 660 ntBASIC31.05■■■□□ 2.56
SMARCA2P51531 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
SMARCA2P51531 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC31.05■■■□□ 2.56
SMARCA2P51531 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC31.05■■■□□ 2.56
SMARCA2P51531 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
SMARCA2P51531 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC31.05■■■□□ 2.56
SMARCA2P51531 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC31.05■■■□□ 2.56
SMARCA2P51531 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC31.05■■■□□ 2.56
SMARCA2P51531 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SMARCA2P51531 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC31.05■■■□□ 2.56
SMARCA2P51531 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SMARCA2P51531 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC31.04■■■□□ 2.56
SMARCA2P51531 AC009949.1-201ENST00000623048 1830 ntBASIC31.04■■■□□ 2.56
SMARCA2P51531 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SMARCA2P51531 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC31.04■■■□□ 2.56
SMARCA2P51531 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SMARCA2P51531 FLYWCH1P1-201ENST00000460917 1874 ntBASIC31.04■■■□□ 2.56
SMARCA2P51531 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
SMARCA2P51531 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
SMARCA2P51531 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC31.04■■■□□ 2.56
SMARCA2P51531 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
SMARCA2P51531 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SMARCA2P51531 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SMARCA2P51531 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SMARCA2P51531 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SMARCA2P51531 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC31.04■■■□□ 2.56
SMARCA2P51531 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SMARCA2P51531 SPDYE22P-201ENST00000582158 798 ntBASIC31.04■■■□□ 2.56
SMARCA2P51531 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC31.04■■■□□ 2.56
SMARCA2P51531 RAB34-224ENST00000636513 888 ntTSL 5 BASIC31.04■■■□□ 2.56
SMARCA2P51531 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC31.04■■■□□ 2.56
SMARCA2P51531 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SMARCA2P51531 HARS-203ENST00000431330 1774 ntTSL 2 BASIC31.03■■■□□ 2.56
SMARCA2P51531 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
SMARCA2P51531 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
SMARCA2P51531 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC31.03■■■□□ 2.56
SMARCA2P51531 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC31.03■■■□□ 2.56
SMARCA2P51531 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC31.03■■■□□ 2.56
SMARCA2P51531 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
SMARCA2P51531 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC31.03■■■□□ 2.56
SMARCA2P51531 OR8S1-201ENST00000310194 1080 ntBASIC31.03■■■□□ 2.56
SMARCA2P51531 AL671277.1-201ENST00000429656 993 ntBASIC31.03■■■□□ 2.56
SMARCA2P51531 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC31.03■■■□□ 2.56
SMARCA2P51531 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC31.03■■■□□ 2.56
SMARCA2P51531 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
SMARCA2P51531 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
SMARCA2P51531 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SMARCA2P51531 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SMARCA2P51531 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SMARCA2P51531 EFTUD1P1-204ENST00000560401 1798 ntBASIC31.02■■■□□ 2.56
SMARCA2P51531 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
SMARCA2P51531 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC31.02■■■□□ 2.56
SMARCA2P51531 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC31.02■■■□□ 2.56
SMARCA2P51531 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC31.02■■■□□ 2.56
SMARCA2P51531 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC31.02■■■□□ 2.56
SMARCA2P51531 COQ6-210ENST00000554920 649 ntTSL 3 BASIC31.02■■■□□ 2.56
SMARCA2P51531 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC31.02■■■□□ 2.56
SMARCA2P51531 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SMARCA2P51531 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC31.02■■■□□ 2.56
SMARCA2P51531 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
SMARCA2P51531 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SMARCA2P51531 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC31.02■■■□□ 2.56
SMARCA2P51531 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
SMARCA2P51531 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
SMARCA2P51531 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
SMARCA2P51531 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC31■■■□□ 2.55
SMARCA2P51531 HNRNPA1P40-201ENST00000426371 1278 ntBASIC31■■■□□ 2.55
SMARCA2P51531 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SMARCA2P51531 AC116407.2-201ENST00000613639 860 ntBASIC31■■■□□ 2.55
SMARCA2P51531 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC31■■■□□ 2.55
SMARCA2P51531 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC31■■■□□ 2.55
SMARCA2P51531 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC31■■■□□ 2.55
SMARCA2P51531 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC31■■■□□ 2.55
SMARCA2P51531 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SMARCA2P51531 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SMARCA2P51531 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC31■■■□□ 2.55
SMARCA2P51531 ENSA-206ENST00000361631 725 ntTSL 2 BASIC31■■■□□ 2.55
SMARCA2P51531 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SMARCA2P51531 HLA-V-201ENST00000429037 534 ntBASIC31■■■□□ 2.55
SMARCA2P51531 SPCS2P4-201ENST00000436160 681 ntBASIC31■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms