Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RORAP35398 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
RORAP35398 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.79■□□□□ 0.28
RORAP35398 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RORAP35398 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RORAP35398 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RORAP35398 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.79■□□□□ 0.28
RORAP35398 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RORAP35398 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RORAP35398 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RORAP35398 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RORAP35398 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.79■□□□□ 0.28
RORAP35398 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RORAP35398 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.79■□□□□ 0.28
RORAP35398 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.79■□□□□ 0.28
RORAP35398 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.79■□□□□ 0.28
RORAP35398 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RORAP35398 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.79■□□□□ 0.28
RORAP35398 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.79■□□□□ 0.28
RORAP35398 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.79■□□□□ 0.28
RORAP35398 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.79■□□□□ 0.28
RORAP35398 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RORAP35398 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RORAP35398 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RORAP35398 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.79■□□□□ 0.28
RORAP35398 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RORAP35398 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.79■□□□□ 0.28
RORAP35398 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RORAP35398 OR6D1P-202ENST00000641007 5290 ntBASIC16.79■□□□□ 0.28
RORAP35398 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RORAP35398 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RORAP35398 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RORAP35398 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.79■□□□□ 0.28
RORAP35398 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RORAP35398 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.78■□□□□ 0.28
RORAP35398 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RORAP35398 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RORAP35398 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RORAP35398 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RORAP35398 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RORAP35398 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RORAP35398 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RORAP35398 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
RORAP35398 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RORAP35398 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.78■□□□□ 0.28
RORAP35398 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RORAP35398 SLC25A1P1-201ENST00000528351 927 ntBASIC16.78■□□□□ 0.28
RORAP35398 AC139887.3-201ENST00000568585 713 ntBASIC16.78■□□□□ 0.28
RORAP35398 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.78■□□□□ 0.28
RORAP35398 AF228730.7-201ENST00000641842 219 ntBASIC16.78■□□□□ 0.28
RORAP35398 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
RORAP35398 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RORAP35398 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
RORAP35398 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RORAP35398 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RORAP35398 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.78■□□□□ 0.28
RORAP35398 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RORAP35398 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RORAP35398 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RORAP35398 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RORAP35398 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RORAP35398 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RORAP35398 AL354751.1-201ENST00000412768 1863 ntBASIC16.78■□□□□ 0.28
RORAP35398 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RORAP35398 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RORAP35398 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.77■□□□□ 0.28
RORAP35398 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RORAP35398 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RORAP35398 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
RORAP35398 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RORAP35398 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.77■□□□□ 0.28
RORAP35398 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.77■□□□□ 0.28
RORAP35398 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RORAP35398 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RORAP35398 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RORAP35398 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RORAP35398 RPS2P28-201ENST00000314255 741 ntBASIC16.77■□□□□ 0.28
RORAP35398 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RORAP35398 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.77■□□□□ 0.28
RORAP35398 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.77■□□□□ 0.28
RORAP35398 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.77■□□□□ 0.28
RORAP35398 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.77■□□□□ 0.28
RORAP35398 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.77■□□□□ 0.28
RORAP35398 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
RORAP35398 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.77■□□□□ 0.28
RORAP35398 AC025062.2-201ENST00000605477 670 ntBASIC16.77■□□□□ 0.28
RORAP35398 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
RORAP35398 AD001527.2-201ENST00000622994 785 ntBASIC16.77■□□□□ 0.28
RORAP35398 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.77■□□□□ 0.28
RORAP35398 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RORAP35398 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RORAP35398 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RORAP35398 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
RORAP35398 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.77■□□□□ 0.27
RORAP35398 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RORAP35398 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.77■□□□□ 0.27
RORAP35398 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RORAP35398 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.77■□□□□ 0.27
RORAP35398 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.77■□□□□ 0.27
RORAP35398 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms