Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
VTNP04004 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
VTNP04004 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
VTNP04004 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VTNP04004 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.31■□□□□ 0.68
VTNP04004 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VTNP04004 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.31■□□□□ 0.68
VTNP04004 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VTNP04004 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.31■□□□□ 0.68
VTNP04004 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VTNP04004 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VTNP04004 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
VTNP04004 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VTNP04004 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VTNP04004 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.31■□□□□ 0.68
VTNP04004 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.31■□□□□ 0.68
VTNP04004 KRT18P13-201ENST00000400056 1290 ntBASIC19.31■□□□□ 0.68
VTNP04004 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.31■□□□□ 0.68
VTNP04004 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.31■□□□□ 0.68
VTNP04004 AC009947.1-201ENST00000444350 727 ntBASIC19.31■□□□□ 0.68
VTNP04004 SIGLEC30P-201ENST00000455569 941 ntBASIC19.31■□□□□ 0.68
VTNP04004 PGAM5P1-201ENST00000518923 814 ntBASIC19.31■□□□□ 0.68
VTNP04004 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.31■□□□□ 0.68
VTNP04004 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.31■□□□□ 0.68
VTNP04004 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
VTNP04004 AC092865.5-201ENST00000545435 363 ntBASIC19.31■□□□□ 0.68
VTNP04004 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.31■□□□□ 0.68
VTNP04004 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.31■□□□□ 0.68
VTNP04004 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.31■□□□□ 0.68
VTNP04004 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.31■□□□□ 0.68
VTNP04004 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.31■□□□□ 0.68
VTNP04004 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
VTNP04004 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VTNP04004 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
VTNP04004 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
VTNP04004 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VTNP04004 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.31■□□□□ 0.68
VTNP04004 AC006504.4-201ENST00000592118 1568 ntBASIC19.31■□□□□ 0.68
VTNP04004 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VTNP04004 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VTNP04004 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VTNP04004 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.31■□□□□ 0.68
VTNP04004 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VTNP04004 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VTNP04004 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
VTNP04004 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VTNP04004 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.3■□□□□ 0.68
VTNP04004 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
VTNP04004 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
VTNP04004 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.3■□□□□ 0.68
VTNP04004 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VTNP04004 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.3■□□□□ 0.68
VTNP04004 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VTNP04004 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.3■□□□□ 0.68
VTNP04004 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
VTNP04004 ELK2BP-201ENST00000415014 1224 ntBASIC19.3■□□□□ 0.68
VTNP04004 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.3■□□□□ 0.68
VTNP04004 AC007967.2-201ENST00000432613 625 ntBASIC19.3■□□□□ 0.68
VTNP04004 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.3■□□□□ 0.68
VTNP04004 AC136632.2-201ENST00000512891 861 ntBASIC19.3■□□□□ 0.68
VTNP04004 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.3■□□□□ 0.68
VTNP04004 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.3■□□□□ 0.68
VTNP04004 FAM197Y3-203ENST00000618346 717 ntBASIC19.3■□□□□ 0.68
VTNP04004 AC004706.3-202ENST00000621574 984 ntBASIC19.3■□□□□ 0.68
VTNP04004 AC005593.1-201ENST00000624894 515 ntBASIC19.3■□□□□ 0.68
VTNP04004 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.3■□□□□ 0.68
VTNP04004 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VTNP04004 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.3■□□□□ 0.68
VTNP04004 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VTNP04004 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VTNP04004 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.3■□□□□ 0.68
VTNP04004 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VTNP04004 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.3■□□□□ 0.68
VTNP04004 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VTNP04004 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.3■□□□□ 0.68
VTNP04004 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VTNP04004 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
VTNP04004 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VTNP04004 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VTNP04004 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VTNP04004 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VTNP04004 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
VTNP04004 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VTNP04004 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
VTNP04004 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VTNP04004 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VTNP04004 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
VTNP04004 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.29■□□□□ 0.68
VTNP04004 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.29■□□□□ 0.68
VTNP04004 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VTNP04004 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VTNP04004 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.29■□□□□ 0.68
VTNP04004 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VTNP04004 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
VTNP04004 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VTNP04004 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
VTNP04004 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.29■□□□□ 0.68
VTNP04004 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VTNP04004 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
VTNP04004 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms