Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL5O76039 KRT18P1-202ENST00000452408 1331 ntBASIC20.55■□□□□ 0.88
CDKL5O76039 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL5O76039 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL5O76039 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CDKL5O76039 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL5O76039 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL5O76039 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL5O76039 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.55■□□□□ 0.88
CDKL5O76039 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL5O76039 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.55■□□□□ 0.88
CDKL5O76039 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.55■□□□□ 0.88
CDKL5O76039 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.55■□□□□ 0.88
CDKL5O76039 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.55■□□□□ 0.88
CDKL5O76039 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CDKL5O76039 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL5O76039 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL5O76039 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL5O76039 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL5O76039 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL5O76039 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
CDKL5O76039 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL5O76039 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL5O76039 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL5O76039 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL5O76039 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL5O76039 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.54■□□□□ 0.88
CDKL5O76039 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.54■□□□□ 0.88
CDKL5O76039 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CDKL5O76039 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.54■□□□□ 0.88
CDKL5O76039 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CDKL5O76039 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL5O76039 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL5O76039 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.54■□□□□ 0.88
CDKL5O76039 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL5O76039 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL5O76039 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.54■□□□□ 0.88
CDKL5O76039 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.54■□□□□ 0.88
CDKL5O76039 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.54■□□□□ 0.88
CDKL5O76039 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
CDKL5O76039 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CDKL5O76039 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL5O76039 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDKL5O76039 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDKL5O76039 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.53■□□□□ 0.88
CDKL5O76039 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.53■□□□□ 0.88
CDKL5O76039 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKL5O76039 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKL5O76039 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKL5O76039 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.53■□□□□ 0.88
CDKL5O76039 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKL5O76039 DRAXINP1-201ENST00000437611 948 ntBASIC20.53■□□□□ 0.88
CDKL5O76039 AC122714.2-201ENST00000502787 707 ntBASIC20.53■□□□□ 0.88
CDKL5O76039 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.53■□□□□ 0.88
CDKL5O76039 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.53■□□□□ 0.88
CDKL5O76039 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CDKL5O76039 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CDKL5O76039 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CDKL5O76039 AC091076.1-201ENST00000610741 619 ntBASIC20.53■□□□□ 0.88
CDKL5O76039 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.53■□□□□ 0.88
CDKL5O76039 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.53■□□□□ 0.88
CDKL5O76039 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKL5O76039 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKL5O76039 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKL5O76039 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKL5O76039 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.53■□□□□ 0.88
CDKL5O76039 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDKL5O76039 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.53■□□□□ 0.88
CDKL5O76039 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.53■□□□□ 0.88
CDKL5O76039 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CDKL5O76039 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.52■□□□□ 0.88
CDKL5O76039 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDKL5O76039 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKL5O76039 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKL5O76039 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.52■□□□□ 0.88
CDKL5O76039 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.52■□□□□ 0.88
CDKL5O76039 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKL5O76039 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.52■□□□□ 0.88
CDKL5O76039 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKL5O76039 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKL5O76039 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.52■□□□□ 0.88
CDKL5O76039 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDKL5O76039 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.52■□□□□ 0.88
CDKL5O76039 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKL5O76039 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
CDKL5O76039 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CDKL5O76039 ARMC10P1-201ENST00000313754 855 ntBASIC20.52■□□□□ 0.88
CDKL5O76039 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
CDKL5O76039 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKL5O76039 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDKL5O76039 FAM220CP-201ENST00000395253 831 ntBASIC20.52■□□□□ 0.88
CDKL5O76039 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.52■□□□□ 0.88
CDKL5O76039 AC009533.2-201ENST00000543664 586 ntBASIC20.52■□□□□ 0.88
CDKL5O76039 Z69720.1-201ENST00000601483 472 ntBASIC20.52■□□□□ 0.88
CDKL5O76039 AL445228.2-201ENST00000605589 952 ntBASIC20.52■□□□□ 0.88
CDKL5O76039 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKL5O76039 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.52■□□□□ 0.88
CDKL5O76039 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.52■□□□□ 0.88
CDKL5O76039 AL358472.4-201ENST00000633140 710 ntBASIC20.52■□□□□ 0.88
CDKL5O76039 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms