Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF253O75346 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF253O75346 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF253O75346 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF253O75346 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF253O75346 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF253O75346 AC012618.2-201ENST00000428058 849 ntBASIC13.81□□□□□ -0.2
ZNF253O75346 TSPY17P-201ENST00000450329 467 ntBASIC13.81□□□□□ -0.2
ZNF253O75346 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF253O75346 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF253O75346 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF253O75346 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC13.81□□□□□ -0.2
ZNF253O75346 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF253O75346 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF253O75346 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13.81□□□□□ -0.2
ZNF253O75346 MIR4674-201ENST00000582457 87 ntBASIC13.81□□□□□ -0.2
ZNF253O75346 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF253O75346 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF253O75346 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF253O75346 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF253O75346 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF253O75346 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
ZNF253O75346 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF253O75346 FLJ16779-201ENST00000612722 7638 ntBASIC13.81□□□□□ -0.2
ZNF253O75346 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF253O75346 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF253O75346 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF253O75346 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ZNF253O75346 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF253O75346 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF253O75346 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF253O75346 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ZNF253O75346 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.81□□□□□ -0.2
ZNF253O75346 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.8□□□□□ -0.2
ZNF253O75346 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF253O75346 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.8□□□□□ -0.2
ZNF253O75346 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ZNF253O75346 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF253O75346 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF253O75346 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
ZNF253O75346 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF253O75346 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF253O75346 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC13.8□□□□□ -0.2
ZNF253O75346 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
ZNF253O75346 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF253O75346 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF253O75346 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF253O75346 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF253O75346 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF253O75346 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF253O75346 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.8□□□□□ -0.2
ZNF253O75346 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF253O75346 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF253O75346 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ZNF253O75346 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
ZNF253O75346 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF253O75346 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.8□□□□□ -0.2
ZNF253O75346 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC13.8□□□□□ -0.2
ZNF253O75346 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC13.8□□□□□ -0.2
ZNF253O75346 DUTP2-201ENST00000519164 463 ntBASIC13.8□□□□□ -0.2
ZNF253O75346 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.8□□□□□ -0.2
ZNF253O75346 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC13.8□□□□□ -0.2
ZNF253O75346 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
ZNF253O75346 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.8□□□□□ -0.2
ZNF253O75346 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC13.8□□□□□ -0.2
ZNF253O75346 AC008687.5-201ENST00000593746 558 ntBASIC13.8□□□□□ -0.2
ZNF253O75346 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF253O75346 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF253O75346 AC103702.1-201ENST00000548801 2630 ntBASIC13.8□□□□□ -0.2
ZNF253O75346 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
ZNF253O75346 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF253O75346 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.8□□□□□ -0.2
ZNF253O75346 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ZNF253O75346 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.8□□□□□ -0.2
ZNF253O75346 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF253O75346 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF253O75346 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.8□□□□□ -0.2
ZNF253O75346 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ZNF253O75346 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.8□□□□□ -0.2
ZNF253O75346 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF253O75346 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC13.8□□□□□ -0.2
ZNF253O75346 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF253O75346 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF253O75346 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF253O75346 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF253O75346 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC13.8□□□□□ -0.2
ZNF253O75346 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF253O75346 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
ZNF253O75346 NME9-203ENST00000383180 2133 ntTSL 2 BASIC13.79□□□□□ -0.2
ZNF253O75346 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF253O75346 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF253O75346 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF253O75346 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
ZNF253O75346 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ZNF253O75346 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
ZNF253O75346 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF253O75346 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.79□□□□□ -0.2
ZNF253O75346 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF253O75346 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.79□□□□□ -0.2
ZNF253O75346 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms