Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
CXCL13O43927 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL13O43927 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.84■□□□□ 0.13
CXCL13O43927 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.84■□□□□ 0.13
CXCL13O43927 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
CXCL13O43927 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL13O43927 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL13O43927 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL13O43927 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CXCL13O43927 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
CXCL13O43927 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CXCL13O43927 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CXCL13O43927 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.83■□□□□ 0.13
CXCL13O43927 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CXCL13O43927 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.83■□□□□ 0.12
CXCL13O43927 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.83■□□□□ 0.12
CXCL13O43927 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
CXCL13O43927 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.83■□□□□ 0.12
CXCL13O43927 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL13O43927 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL13O43927 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CXCL13O43927 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL13O43927 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL13O43927 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL13O43927 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL13O43927 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.83■□□□□ 0.12
CXCL13O43927 SLC25A6P5-201ENST00000435663 894 ntBASIC15.83■□□□□ 0.12
CXCL13O43927 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.83■□□□□ 0.12
CXCL13O43927 SAPCD2P3-201ENST00000455031 850 ntBASIC15.83■□□□□ 0.12
CXCL13O43927 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL13O43927 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.83■□□□□ 0.12
CXCL13O43927 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.83■□□□□ 0.12
CXCL13O43927 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CXCL13O43927 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL13O43927 REXO1L6P-202ENST00000619970 1078 ntBASIC15.83■□□□□ 0.12
CXCL13O43927 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.83■□□□□ 0.12
CXCL13O43927 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CXCL13O43927 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CXCL13O43927 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL13O43927 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.83■□□□□ 0.12
CXCL13O43927 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CXCL13O43927 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CXCL13O43927 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL13O43927 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
CXCL13O43927 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL13O43927 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.83■□□□□ 0.12
CXCL13O43927 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.83■□□□□ 0.12
CXCL13O43927 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL13O43927 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CXCL13O43927 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL13O43927 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL13O43927 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.82■□□□□ 0.12
CXCL13O43927 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.82■□□□□ 0.12
CXCL13O43927 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
CXCL13O43927 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CXCL13O43927 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL13O43927 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL13O43927 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.82■□□□□ 0.12
CXCL13O43927 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CXCL13O43927 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL13O43927 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL13O43927 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL13O43927 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CXCL13O43927 AC103564.2-201ENST00000432853 1299 ntBASIC15.82■□□□□ 0.12
CXCL13O43927 ABCD1P5-201ENST00000445663 754 ntBASIC15.82■□□□□ 0.12
CXCL13O43927 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.82■□□□□ 0.12
CXCL13O43927 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.82■□□□□ 0.12
CXCL13O43927 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.82■□□□□ 0.12
CXCL13O43927 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.82■□□□□ 0.12
CXCL13O43927 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL13O43927 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.82■□□□□ 0.12
CXCL13O43927 AP001269.4-201ENST00000609611 512 ntBASIC15.82■□□□□ 0.12
CXCL13O43927 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.82■□□□□ 0.12
CXCL13O43927 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.82■□□□□ 0.12
CXCL13O43927 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CXCL13O43927 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.82■□□□□ 0.12
CXCL13O43927 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL13O43927 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.82■□□□□ 0.12
CXCL13O43927 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL13O43927 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.82■□□□□ 0.12
CXCL13O43927 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.82■□□□□ 0.12
CXCL13O43927 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL13O43927 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.82■□□□□ 0.12
CXCL13O43927 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.82■□□□□ 0.12
CXCL13O43927 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL13O43927 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.82■□□□□ 0.12
CXCL13O43927 AC008764.6-201ENST00000595909 2069 ntBASIC15.82■□□□□ 0.12
CXCL13O43927 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL13O43927 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.82■□□□□ 0.12
CXCL13O43927 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CXCL13O43927 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CXCL13O43927 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL13O43927 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.82■□□□□ 0.12
CXCL13O43927 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCL13O43927 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.81■□□□□ 0.12
CXCL13O43927 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCL13O43927 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCL13O43927 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CXCL13O43927 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCL13O43927 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms