Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
UPK1AO00322 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.77■□□□□ 0.28
UPK1AO00322 AGGF1P2-201ENST00000426656 2106 ntBASIC16.77■□□□□ 0.28
UPK1AO00322 FAM210CP-201ENST00000445714 574 ntBASIC16.77■□□□□ 0.28
UPK1AO00322 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UPK1AO00322 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UPK1AO00322 RNF126P1-202ENST00000569893 925 ntBASIC16.77■□□□□ 0.28
UPK1AO00322 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.77■□□□□ 0.28
UPK1AO00322 AC005332.3-201ENST00000589904 676 ntBASIC16.77■□□□□ 0.28
UPK1AO00322 AC009154.2-201ENST00000621177 724 ntBASIC16.77■□□□□ 0.28
UPK1AO00322 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.77■□□□□ 0.28
UPK1AO00322 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.77■□□□□ 0.28
UPK1AO00322 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UPK1AO00322 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UPK1AO00322 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.77■□□□□ 0.27
UPK1AO00322 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UPK1AO00322 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
UPK1AO00322 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
UPK1AO00322 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.27
UPK1AO00322 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
UPK1AO00322 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1AO00322 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1AO00322 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1AO00322 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1AO00322 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1AO00322 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
UPK1AO00322 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
UPK1AO00322 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1AO00322 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1AO00322 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.76■□□□□ 0.27
UPK1AO00322 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1AO00322 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.76■□□□□ 0.27
UPK1AO00322 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.76■□□□□ 0.27
UPK1AO00322 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
UPK1AO00322 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
UPK1AO00322 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
UPK1AO00322 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1AO00322 TSPY12P-201ENST00000421279 868 ntBASIC16.76■□□□□ 0.27
UPK1AO00322 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.76■□□□□ 0.27
UPK1AO00322 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1AO00322 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.76■□□□□ 0.27
UPK1AO00322 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.76■□□□□ 0.27
UPK1AO00322 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.76■□□□□ 0.27
UPK1AO00322 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
UPK1AO00322 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.76■□□□□ 0.27
UPK1AO00322 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1AO00322 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1AO00322 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1AO00322 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1AO00322 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1AO00322 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.76■□□□□ 0.27
UPK1AO00322 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1AO00322 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1AO00322 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1AO00322 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1AO00322 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1AO00322 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1AO00322 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1AO00322 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.76■□□□□ 0.27
UPK1AO00322 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.76■□□□□ 0.27
UPK1AO00322 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1AO00322 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
UPK1AO00322 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1AO00322 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1AO00322 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
UPK1AO00322 LINC00304-203ENST00000565008 1864 ntBASIC16.76■□□□□ 0.27
UPK1AO00322 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.75■□□□□ 0.27
UPK1AO00322 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
UPK1AO00322 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.75■□□□□ 0.27
UPK1AO00322 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1AO00322 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1AO00322 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.75■□□□□ 0.27
UPK1AO00322 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
UPK1AO00322 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1AO00322 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
UPK1AO00322 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1AO00322 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1AO00322 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1AO00322 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1AO00322 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.75■□□□□ 0.27
UPK1AO00322 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1AO00322 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.75■□□□□ 0.27
UPK1AO00322 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.75■□□□□ 0.27
UPK1AO00322 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1AO00322 AL049597.2-201ENST00000565575 961 ntBASIC16.75■□□□□ 0.27
UPK1AO00322 AL390719.2-201ENST00000606993 987 ntBASIC16.75■□□□□ 0.27
UPK1AO00322 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1AO00322 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1AO00322 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1AO00322 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
UPK1AO00322 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1AO00322 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1AO00322 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
UPK1AO00322 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.75■□□□□ 0.27
UPK1AO00322 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.75■□□□□ 0.27
UPK1AO00322 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1AO00322 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1AO00322 AC106886.4-201ENST00000623557 2502 ntBASIC16.74■□□□□ 0.27
UPK1AO00322 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1AO00322 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms