Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DFFAO00273 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DFFAO00273 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DFFAO00273 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DFFAO00273 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
DFFAO00273 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DFFAO00273 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DFFAO00273 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.19■□□□□ 0.5
DFFAO00273 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.19■□□□□ 0.5
DFFAO00273 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DFFAO00273 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DFFAO00273 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.19■□□□□ 0.5
DFFAO00273 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.19■□□□□ 0.5
DFFAO00273 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DFFAO00273 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.19■□□□□ 0.5
DFFAO00273 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DFFAO00273 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DFFAO00273 AC096633.1-201ENST00000422446 749 ntBASIC18.19■□□□□ 0.5
DFFAO00273 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.19■□□□□ 0.5
DFFAO00273 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
DFFAO00273 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
DFFAO00273 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.19■□□□□ 0.5
DFFAO00273 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.19■□□□□ 0.5
DFFAO00273 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.19■□□□□ 0.5
DFFAO00273 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.19■□□□□ 0.5
DFFAO00273 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DFFAO00273 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
DFFAO00273 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.19■□□□□ 0.5
DFFAO00273 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.19■□□□□ 0.5
DFFAO00273 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DFFAO00273 AL138831.2-201ENST00000606564 490 ntBASIC18.19■□□□□ 0.5
DFFAO00273 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
DFFAO00273 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DFFAO00273 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
DFFAO00273 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.19■□□□□ 0.5
DFFAO00273 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
DFFAO00273 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
DFFAO00273 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.19■□□□□ 0.5
DFFAO00273 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.19■□□□□ 0.5
DFFAO00273 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.19■□□□□ 0.5
DFFAO00273 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
DFFAO00273 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DFFAO00273 BX276092.7-203ENST00000637198 1536 ntBASIC18.18■□□□□ 0.5
DFFAO00273 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.18■□□□□ 0.5
DFFAO00273 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.18■□□□□ 0.5
DFFAO00273 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DFFAO00273 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.18■□□□□ 0.5
DFFAO00273 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
DFFAO00273 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.18■□□□□ 0.5
DFFAO00273 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DFFAO00273 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.18■□□□□ 0.5
DFFAO00273 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DFFAO00273 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.18■□□□□ 0.5
DFFAO00273 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.18■□□□□ 0.5
DFFAO00273 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DFFAO00273 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
DFFAO00273 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.18■□□□□ 0.5
DFFAO00273 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DFFAO00273 AC007967.3-201ENST00000434308 558 ntBASIC18.18■□□□□ 0.5
DFFAO00273 HCG4P8-203ENST00000443049 980 ntBASIC18.18■□□□□ 0.5
DFFAO00273 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DFFAO00273 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
DFFAO00273 AC104819.1-201ENST00000504587 486 ntBASIC18.18■□□□□ 0.5
DFFAO00273 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.18■□□□□ 0.5
DFFAO00273 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.18■□□□□ 0.5
DFFAO00273 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.18■□□□□ 0.5
DFFAO00273 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DFFAO00273 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DFFAO00273 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DFFAO00273 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DFFAO00273 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DFFAO00273 NSUN5P1-202ENST00000421140 1535 ntBASIC18.18■□□□□ 0.5
DFFAO00273 NSUN5P2-203ENST00000457352 1529 ntBASIC18.18■□□□□ 0.5
DFFAO00273 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
DFFAO00273 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
DFFAO00273 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DFFAO00273 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.17■□□□□ 0.5
DFFAO00273 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
DFFAO00273 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
DFFAO00273 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
DFFAO00273 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DFFAO00273 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.17■□□□□ 0.5
DFFAO00273 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.17■□□□□ 0.5
DFFAO00273 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.17■□□□□ 0.5
DFFAO00273 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DFFAO00273 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.17■□□□□ 0.5
DFFAO00273 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
DFFAO00273 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DFFAO00273 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DFFAO00273 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DFFAO00273 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.17■□□□□ 0.5
DFFAO00273 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DFFAO00273 AC097374.2-201ENST00000618617 1306 ntBASIC18.17■□□□□ 0.5
DFFAO00273 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DFFAO00273 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
DFFAO00273 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.17■□□□□ 0.5
DFFAO00273 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.17■□□□□ 0.5
DFFAO00273 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
DFFAO00273 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
DFFAO00273 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms