Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.33■■□□□ 1.01
FOXD4L1Q9NU39 AC022784.5-201ENST00000522241 437 ntBASIC21.33■■□□□ 1.01
FOXD4L1Q9NU39 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.33■■□□□ 1.01
FOXD4L1Q9NU39 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.33■■□□□ 1.01
FOXD4L1Q9NU39 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
FOXD4L1Q9NU39 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
FOXD4L1Q9NU39 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
FOXD4L1Q9NU39 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC21.33■■□□□ 1
FOXD4L1Q9NU39 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
FOXD4L1Q9NU39 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
FOXD4L1Q9NU39 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.33■■□□□ 1
FOXD4L1Q9NU39 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 HOXB1-202ENST00000577092 1414 ntBASIC21.32■■□□□ 1
FOXD4L1Q9NU39 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 TSPY20P-201ENST00000450910 630 ntBASIC21.32■■□□□ 1
FOXD4L1Q9NU39 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 CA15P1-201ENST00000481698 905 ntBASIC21.32■■□□□ 1
FOXD4L1Q9NU39 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 AC079328.2-201ENST00000561241 3354 ntBASIC21.32■■□□□ 1
FOXD4L1Q9NU39 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
FOXD4L1Q9NU39 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
FOXD4L1Q9NU39 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
FOXD4L1Q9NU39 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
FOXD4L1Q9NU39 CES3-203ENST00000543856 3178 ntTSL 2 BASIC21.31■■□□□ 1
FOXD4L1Q9NU39 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.31■■□□□ 1
FOXD4L1Q9NU39 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
FOXD4L1Q9NU39 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
FOXD4L1Q9NU39 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
FOXD4L1Q9NU39 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.31■■□□□ 1
FOXD4L1Q9NU39 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.31■■□□□ 1
FOXD4L1Q9NU39 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
FOXD4L1Q9NU39 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC21.31■■□□□ 1
FOXD4L1Q9NU39 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC21.31■■□□□ 1
FOXD4L1Q9NU39 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
FOXD4L1Q9NU39 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
FOXD4L1Q9NU39 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.31■■□□□ 1
FOXD4L1Q9NU39 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
FOXD4L1Q9NU39 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
FOXD4L1Q9NU39 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC21.31■■□□□ 1
FOXD4L1Q9NU39 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.3■■□□□ 1
FOXD4L1Q9NU39 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
FOXD4L1Q9NU39 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXD4L1Q9NU39 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC21.3■■□□□ 1
FOXD4L1Q9NU39 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.3■■□□□ 1
FOXD4L1Q9NU39 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXD4L1Q9NU39 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXD4L1Q9NU39 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.3■■□□□ 1
FOXD4L1Q9NU39 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
FOXD4L1Q9NU39 KRT18P29-201ENST00000397031 1267 ntBASIC21.3■■□□□ 1
FOXD4L1Q9NU39 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.3■■□□□ 1
FOXD4L1Q9NU39 AL158047.1-201ENST00000445918 881 ntBASIC21.3■■□□□ 1
FOXD4L1Q9NU39 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.3■■□□□ 1
FOXD4L1Q9NU39 AC118282.1-201ENST00000506408 765 ntBASIC21.3■■□□□ 1
FOXD4L1Q9NU39 MTND2P31-201ENST00000512602 616 ntBASIC21.3■■□□□ 1
FOXD4L1Q9NU39 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC21.3■■□□□ 1
FOXD4L1Q9NU39 AC142381.4-202ENST00000563973 229 ntBASIC21.3■■□□□ 1
FOXD4L1Q9NU39 HIST2H4B-201ENST00000579512 1132 ntAPPRIS P1 BASIC21.3■■□□□ 1
FOXD4L1Q9NU39 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC21.3■■□□□ 1
FOXD4L1Q9NU39 AC005785.2-201ENST00000624655 631 ntBASIC21.3■■□□□ 1
FOXD4L1Q9NU39 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.3■■□□□ 1
FOXD4L1Q9NU39 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.3■■□□□ 1
FOXD4L1Q9NU39 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC21.3■■□□□ 1
FOXD4L1Q9NU39 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXD4L1Q9NU39 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXD4L1Q9NU39 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXD4L1Q9NU39 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
FOXD4L1Q9NU39 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC21.3■■□□□ 1
FOXD4L1Q9NU39 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC21.29■■□□□ 1
FOXD4L1Q9NU39 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.29■■□□□ 1
FOXD4L1Q9NU39 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
FOXD4L1Q9NU39 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
FOXD4L1Q9NU39 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms