Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSU72Q9NP77 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSU72Q9NP77 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.56■□□□□ 0.4
SSU72Q9NP77 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSU72Q9NP77 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSU72Q9NP77 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSU72Q9NP77 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSU72Q9NP77 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSU72Q9NP77 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.55■□□□□ 0.4
SSU72Q9NP77 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSU72Q9NP77 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSU72Q9NP77 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.55■□□□□ 0.4
SSU72Q9NP77 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SSU72Q9NP77 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSU72Q9NP77 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.55■□□□□ 0.4
SSU72Q9NP77 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSU72Q9NP77 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SSU72Q9NP77 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSU72Q9NP77 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSU72Q9NP77 ID1-201ENST00000376105 1233 ntBASIC17.55■□□□□ 0.4
SSU72Q9NP77 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSU72Q9NP77 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.55■□□□□ 0.4
SSU72Q9NP77 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSU72Q9NP77 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SSU72Q9NP77 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSU72Q9NP77 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSU72Q9NP77 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.55■□□□□ 0.4
SSU72Q9NP77 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSU72Q9NP77 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SSU72Q9NP77 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSU72Q9NP77 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSU72Q9NP77 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.55■□□□□ 0.4
SSU72Q9NP77 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SSU72Q9NP77 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SSU72Q9NP77 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSU72Q9NP77 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SSU72Q9NP77 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSU72Q9NP77 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSU72Q9NP77 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSU72Q9NP77 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSU72Q9NP77 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSU72Q9NP77 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.54■□□□□ 0.4
SSU72Q9NP77 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSU72Q9NP77 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SSU72Q9NP77 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSU72Q9NP77 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSU72Q9NP77 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSU72Q9NP77 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSU72Q9NP77 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSU72Q9NP77 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSU72Q9NP77 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.54■□□□□ 0.4
SSU72Q9NP77 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
SSU72Q9NP77 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.54■□□□□ 0.4
SSU72Q9NP77 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.54■□□□□ 0.4
SSU72Q9NP77 AC233702.5-201ENST00000584107 538 ntBASIC17.54■□□□□ 0.4
SSU72Q9NP77 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSU72Q9NP77 AC026471.5-201ENST00000615068 467 ntBASIC17.54■□□□□ 0.4
SSU72Q9NP77 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
SSU72Q9NP77 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSU72Q9NP77 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSU72Q9NP77 AL139384.1-201ENST00000612143 3047 ntBASIC17.54■□□□□ 0.4
SSU72Q9NP77 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSU72Q9NP77 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSU72Q9NP77 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
SSU72Q9NP77 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSU72Q9NP77 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SSU72Q9NP77 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.54■□□□□ 0.4
SSU72Q9NP77 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.54■□□□□ 0.4
SSU72Q9NP77 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSU72Q9NP77 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SSU72Q9NP77 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSU72Q9NP77 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSU72Q9NP77 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSU72Q9NP77 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.53■□□□□ 0.4
SSU72Q9NP77 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.53■□□□□ 0.4
SSU72Q9NP77 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SSU72Q9NP77 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSU72Q9NP77 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSU72Q9NP77 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSU72Q9NP77 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSU72Q9NP77 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSU72Q9NP77 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
SSU72Q9NP77 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SSU72Q9NP77 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.53■□□□□ 0.4
SSU72Q9NP77 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.53■□□□□ 0.4
SSU72Q9NP77 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
SSU72Q9NP77 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSU72Q9NP77 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SSU72Q9NP77 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSU72Q9NP77 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSU72Q9NP77 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.53■□□□□ 0.4
SSU72Q9NP77 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.53■□□□□ 0.4
SSU72Q9NP77 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.53■□□□□ 0.4
SSU72Q9NP77 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.53■□□□□ 0.4
SSU72Q9NP77 AL049637.2-201ENST00000641778 930 ntBASIC17.53■□□□□ 0.4
SSU72Q9NP77 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSU72Q9NP77 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSU72Q9NP77 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSU72Q9NP77 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
SSU72Q9NP77 PCDH8P1-201ENST00000428983 2773 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms