Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GFI1Q99684 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.27■□□□□ 0.04
GFI1Q99684 CD99P1-205ENST00000527459 561 ntBASIC15.27■□□□□ 0.04
GFI1Q99684 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GFI1Q99684 AP003071.4-201ENST00000562276 1284 ntBASIC15.27■□□□□ 0.04
GFI1Q99684 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.27■□□□□ 0.04
GFI1Q99684 AC116562.4-202ENST00000641738 218 ntBASIC15.27■□□□□ 0.04
GFI1Q99684 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GFI1Q99684 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.27■□□□□ 0.03
GFI1Q99684 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.27■□□□□ 0.03
GFI1Q99684 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GFI1Q99684 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GFI1Q99684 AC078925.2-201ENST00000624013 1973 ntBASIC15.27■□□□□ 0.03
GFI1Q99684 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GFI1Q99684 LINC02199-201ENST00000506655 2702 ntBASIC15.27■□□□□ 0.03
GFI1Q99684 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GFI1Q99684 AC092171.3-201ENST00000610122 2651 ntBASIC15.27■□□□□ 0.03
GFI1Q99684 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GFI1Q99684 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GFI1Q99684 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GFI1Q99684 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GFI1Q99684 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GFI1Q99684 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GFI1Q99684 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
GFI1Q99684 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFI1Q99684 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFI1Q99684 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
GFI1Q99684 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFI1Q99684 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFI1Q99684 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFI1Q99684 LINC02012-201ENST00000608206 1725 ntBASIC15.26■□□□□ 0.03
GFI1Q99684 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.26■□□□□ 0.03
GFI1Q99684 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFI1Q99684 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
GFI1Q99684 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
GFI1Q99684 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFI1Q99684 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.26■□□□□ 0.03
GFI1Q99684 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.26■□□□□ 0.03
GFI1Q99684 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFI1Q99684 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.26■□□□□ 0.03
GFI1Q99684 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.26■□□□□ 0.03
GFI1Q99684 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFI1Q99684 AC009947.2-201ENST00000444014 672 ntBASIC15.26■□□□□ 0.03
GFI1Q99684 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.26■□□□□ 0.03
GFI1Q99684 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.26■□□□□ 0.03
GFI1Q99684 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.26■□□□□ 0.03
GFI1Q99684 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.26■□□□□ 0.03
GFI1Q99684 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.26■□□□□ 0.03
GFI1Q99684 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.26■□□□□ 0.03
GFI1Q99684 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.26■□□□□ 0.03
GFI1Q99684 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GFI1Q99684 AL157888.1-201ENST00000631930 593 ntBASIC15.26■□□□□ 0.03
GFI1Q99684 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GFI1Q99684 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.26■□□□□ 0.03
GFI1Q99684 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFI1Q99684 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GFI1Q99684 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFI1Q99684 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GFI1Q99684 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.26■□□□□ 0.03
GFI1Q99684 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.26■□□□□ 0.03
GFI1Q99684 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.26■□□□□ 0.03
GFI1Q99684 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFI1Q99684 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFI1Q99684 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.26■□□□□ 0.03
GFI1Q99684 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GFI1Q99684 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
GFI1Q99684 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
GFI1Q99684 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
GFI1Q99684 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
GFI1Q99684 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
GFI1Q99684 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFI1Q99684 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
GFI1Q99684 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GFI1Q99684 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFI1Q99684 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
GFI1Q99684 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
GFI1Q99684 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.25■□□□□ 0.03
GFI1Q99684 FITM1-202ENST00000559294 800 ntBASIC15.25■□□□□ 0.03
GFI1Q99684 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.25■□□□□ 0.03
GFI1Q99684 AP000525.1-201ENST00000608286 694 ntBASIC15.25■□□□□ 0.03
GFI1Q99684 AC010653.2-201ENST00000623505 997 ntBASIC15.25■□□□□ 0.03
GFI1Q99684 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.25■□□□□ 0.03
GFI1Q99684 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFI1Q99684 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GFI1Q99684 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFI1Q99684 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFI1Q99684 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
GFI1Q99684 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.25■□□□□ 0.03
GFI1Q99684 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.25■□□□□ 0.03
GFI1Q99684 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFI1Q99684 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFI1Q99684 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
GFI1Q99684 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
GFI1Q99684 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFI1Q99684 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.25■□□□□ 0.03
GFI1Q99684 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
GFI1Q99684 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.24■□□□□ 0.03
GFI1Q99684 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GFI1Q99684 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.24■□□□□ 0.03
GFI1Q99684 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms