Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 AL139327.4-201ENST00000612362 153 ntBASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 AC005332.1-201ENST00000577698 1310 ntBASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 HTR7P1-202ENST00000624664 4411 ntBASIC18.62■□□□□ 0.57
VCPIP1Q96JH7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 MYCLP1-201ENST00000372451 1075 ntBASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 KRT18P56-201ENST00000507275 550 ntBASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 AC005336.2-201ENST00000593183 939 ntBASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 AL121672.3-201ENST00000608644 468 ntBASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 AC116407.4-201ENST00000623319 1061 ntBASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 LTB4R2-202ENST00000528054 3092 ntBASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VCPIP1Q96JH7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.6■□□□□ 0.57
VCPIP1Q96JH7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
VCPIP1Q96JH7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
VCPIP1Q96JH7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VCPIP1Q96JH7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.6■□□□□ 0.57
VCPIP1Q96JH7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VCPIP1Q96JH7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VCPIP1Q96JH7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
VCPIP1Q96JH7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.6■□□□□ 0.57
VCPIP1Q96JH7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.6■□□□□ 0.57
VCPIP1Q96JH7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VCPIP1Q96JH7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VCPIP1Q96JH7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VCPIP1Q96JH7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VCPIP1Q96JH7 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.6■□□□□ 0.57
VCPIP1Q96JH7 CHCHD2P8-201ENST00000429873 447 ntBASIC18.6■□□□□ 0.57
VCPIP1Q96JH7 AC103564.2-201ENST00000432853 1299 ntBASIC18.6■□□□□ 0.57
VCPIP1Q96JH7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
VCPIP1Q96JH7 BX276092.5-203ENST00000456199 560 ntBASIC18.6■□□□□ 0.57
VCPIP1Q96JH7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms