Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.83■□□□□ 0.93
BRF1Q92994 AC011840.4-201ENST00000578471 627 ntBASIC20.83■□□□□ 0.93
BRF1Q92994 AC125634.1-201ENST00000438758 1403 ntBASIC20.83■□□□□ 0.93
BRF1Q92994 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.83■□□□□ 0.93
BRF1Q92994 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
BRF1Q92994 AC108860.2-201ENST00000562760 2183 ntBASIC20.83■□□□□ 0.92
BRF1Q92994 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
BRF1Q92994 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
BRF1Q92994 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
BRF1Q92994 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
BRF1Q92994 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.83■□□□□ 0.92
BRF1Q92994 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.83■□□□□ 0.92
BRF1Q92994 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
BRF1Q92994 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
BRF1Q92994 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.83■□□□□ 0.92
BRF1Q92994 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.83■□□□□ 0.92
BRF1Q92994 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.83■□□□□ 0.92
BRF1Q92994 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
BRF1Q92994 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
BRF1Q92994 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
BRF1Q92994 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.82■□□□□ 0.92
BRF1Q92994 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.82■□□□□ 0.92
BRF1Q92994 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
BRF1Q92994 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRF1Q92994 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRF1Q92994 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRF1Q92994 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.82■□□□□ 0.92
BRF1Q92994 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.82■□□□□ 0.92
BRF1Q92994 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.82■□□□□ 0.92
BRF1Q92994 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRF1Q92994 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.82■□□□□ 0.92
BRF1Q92994 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
BRF1Q92994 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRF1Q92994 MIR1224-201ENST00000408193 85 ntBASIC20.82■□□□□ 0.92
BRF1Q92994 AP002383.4-201ENST00000442518 975 ntBASIC20.82■□□□□ 0.92
BRF1Q92994 TSSC2-201ENST00000450217 709 ntBASIC20.82■□□□□ 0.92
BRF1Q92994 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.82■□□□□ 0.92
BRF1Q92994 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.82■□□□□ 0.92
BRF1Q92994 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BRF1Q92994 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRF1Q92994 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.82■□□□□ 0.92
BRF1Q92994 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.82■□□□□ 0.92
BRF1Q92994 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.82■□□□□ 0.92
BRF1Q92994 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRF1Q92994 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.82■□□□□ 0.92
BRF1Q92994 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRF1Q92994 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRF1Q92994 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRF1Q92994 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRF1Q92994 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
BRF1Q92994 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRF1Q92994 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRF1Q92994 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
BRF1Q92994 AL138688.1-201ENST00000624851 1594 ntBASIC20.81■□□□□ 0.92
BRF1Q92994 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRF1Q92994 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BRF1Q92994 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BRF1Q92994 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRF1Q92994 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
BRF1Q92994 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRF1Q92994 ARMC10P1-201ENST00000313754 855 ntBASIC20.81■□□□□ 0.92
BRF1Q92994 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BRF1Q92994 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRF1Q92994 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRF1Q92994 AC007967.3-201ENST00000434308 558 ntBASIC20.81■□□□□ 0.92
BRF1Q92994 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.81■□□□□ 0.92
BRF1Q92994 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.81■□□□□ 0.92
BRF1Q92994 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRF1Q92994 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.81■□□□□ 0.92
BRF1Q92994 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.81■□□□□ 0.92
BRF1Q92994 AP005901.3-202ENST00000581653 237 ntBASIC20.81■□□□□ 0.92
BRF1Q92994 AL138831.2-201ENST00000606564 490 ntBASIC20.81■□□□□ 0.92
BRF1Q92994 AP000550.4-202ENST00000639755 178 ntBASIC20.81■□□□□ 0.92
BRF1Q92994 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRF1Q92994 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRF1Q92994 AC020916.1-201ENST00000587762 1774 ntBASIC20.81■□□□□ 0.92
BRF1Q92994 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
BRF1Q92994 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRF1Q92994 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRF1Q92994 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
BRF1Q92994 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRF1Q92994 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
BRF1Q92994 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRF1Q92994 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRF1Q92994 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BRF1Q92994 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BRF1Q92994 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BRF1Q92994 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.8■□□□□ 0.92
BRF1Q92994 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BRF1Q92994 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRF1Q92994 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.8■□□□□ 0.92
BRF1Q92994 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.8■□□□□ 0.92
BRF1Q92994 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
BRF1Q92994 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRF1Q92994 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRF1Q92994 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.8■□□□□ 0.92
BRF1Q92994 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.8■□□□□ 0.92
BRF1Q92994 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.8■□□□□ 0.92
BRF1Q92994 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
BRF1Q92994 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms