Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC148Q8NFR7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC148Q8NFR7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
CCDC148Q8NFR7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC148Q8NFR7 AC068880.1-201ENST00000507289 2297 ntBASIC20.41■□□□□ 0.86
CCDC148Q8NFR7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC148Q8NFR7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC148Q8NFR7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC148Q8NFR7 BNIP3P18-201ENST00000593976 575 ntBASIC20.41■□□□□ 0.86
CCDC148Q8NFR7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC148Q8NFR7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC148Q8NFR7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC148Q8NFR7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC148Q8NFR7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC148Q8NFR7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC148Q8NFR7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC148Q8NFR7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC148Q8NFR7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC148Q8NFR7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC148Q8NFR7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC148Q8NFR7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
CCDC148Q8NFR7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CCDC148Q8NFR7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC148Q8NFR7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC148Q8NFR7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 FAM220CP-201ENST00000395253 831 ntBASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 AC096582.2-201ENST00000510860 516 ntBASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 MIR3652-201ENST00000579335 131 ntBASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 AC134043.2-201ENST00000624206 2238 ntBASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC148Q8NFR7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CCDC148Q8NFR7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC148Q8NFR7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.39■□□□□ 0.86
CCDC148Q8NFR7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC148Q8NFR7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.39■□□□□ 0.86
CCDC148Q8NFR7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC148Q8NFR7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CCDC148Q8NFR7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC148Q8NFR7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CCDC148Q8NFR7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC148Q8NFR7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC148Q8NFR7 COX5BP2-201ENST00000392354 334 ntBASIC20.39■□□□□ 0.85
CCDC148Q8NFR7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC148Q8NFR7 POM121L3P-201ENST00000419331 1163 ntBASIC20.39■□□□□ 0.85
CCDC148Q8NFR7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
CCDC148Q8NFR7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC148Q8NFR7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
CCDC148Q8NFR7 AC011467.2-201ENST00000598425 242 ntBASIC20.39■□□□□ 0.85
CCDC148Q8NFR7 AC099336.1-202ENST00000602961 463 ntBASIC20.39■□□□□ 0.85
CCDC148Q8NFR7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC148Q8NFR7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC148Q8NFR7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
CCDC148Q8NFR7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC148Q8NFR7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC148Q8NFR7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC148Q8NFR7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC148Q8NFR7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC148Q8NFR7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC148Q8NFR7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC148Q8NFR7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CCDC148Q8NFR7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC148Q8NFR7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 TP73-AS1-210ENST00000637775 1455 ntBASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 AC122714.2-201ENST00000502787 707 ntBASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms