Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC28Q86X40 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC28Q86X40 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC28Q86X40 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRC28Q86X40 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC28Q86X40 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LRRC28Q86X40 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRC28Q86X40 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC28Q86X40 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LRRC28Q86X40 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LRRC28Q86X40 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC28Q86X40 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC28Q86X40 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC28Q86X40 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC28Q86X40 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC28Q86X40 CROCCP1-201ENST00000426910 5675 ntBASIC15.78■□□□□ 0.12
LRRC28Q86X40 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC28Q86X40 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LRRC28Q86X40 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.78■□□□□ 0.12
LRRC28Q86X40 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC28Q86X40 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC28Q86X40 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC28Q86X40 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LRRC28Q86X40 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
LRRC28Q86X40 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC28Q86X40 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
LRRC28Q86X40 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRC28Q86X40 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRC28Q86X40 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
LRRC28Q86X40 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC28Q86X40 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRC28Q86X40 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LRRC28Q86X40 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC28Q86X40 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRC28Q86X40 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC28Q86X40 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC28Q86X40 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC28Q86X40 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.77■□□□□ 0.12
LRRC28Q86X40 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.12
LRRC28Q86X40 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC28Q86X40 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC28Q86X40 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.77■□□□□ 0.12
LRRC28Q86X40 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
LRRC28Q86X40 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LRRC28Q86X40 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC28Q86X40 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC28Q86X40 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC28Q86X40 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC28Q86X40 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC28Q86X40 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC28Q86X40 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.77■□□□□ 0.12
LRRC28Q86X40 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
LRRC28Q86X40 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC28Q86X40 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC28Q86X40 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC28Q86X40 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.77■□□□□ 0.12
LRRC28Q86X40 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.77■□□□□ 0.12
LRRC28Q86X40 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
LRRC28Q86X40 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC28Q86X40 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC28Q86X40 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.77■□□□□ 0.12
LRRC28Q86X40 COX11P1-201ENST00000489116 835 ntBASIC15.77■□□□□ 0.12
LRRC28Q86X40 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
LRRC28Q86X40 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.77■□□□□ 0.12
LRRC28Q86X40 AC006011.2-201ENST00000621313 1158 ntBASIC15.77■□□□□ 0.12
LRRC28Q86X40 AL590326.2-201ENST00000625139 305 ntBASIC15.77■□□□□ 0.12
LRRC28Q86X40 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
LRRC28Q86X40 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRRC28Q86X40 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LRRC28Q86X40 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.77■□□□□ 0.11
LRRC28Q86X40 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.11
LRRC28Q86X40 PCDHB19P-201ENST00000570871 2371 ntBASIC15.77■□□□□ 0.11
LRRC28Q86X40 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRRC28Q86X40 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LRRC28Q86X40 AC093010.1-201ENST00000473625 1624 ntBASIC15.76■□□□□ 0.11
LRRC28Q86X40 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC28Q86X40 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRC28Q86X40 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC28Q86X40 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC28Q86X40 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC28Q86X40 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC28Q86X40 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRC28Q86X40 UBALD1-205ENST00000590891 2641 ntBASIC15.76■□□□□ 0.11
LRRC28Q86X40 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
LRRC28Q86X40 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC28Q86X40 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC28Q86X40 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC28Q86X40 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC28Q86X40 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.76■□□□□ 0.11
LRRC28Q86X40 AL023284.2-201ENST00000405850 579 ntBASIC15.76■□□□□ 0.11
LRRC28Q86X40 AK4P3-201ENST00000418260 669 ntBASIC15.76■□□□□ 0.11
LRRC28Q86X40 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
LRRC28Q86X40 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC28Q86X40 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC28Q86X40 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
LRRC28Q86X40 DUX4L26-201ENST00000489078 1255 ntBASIC15.76■□□□□ 0.11
LRRC28Q86X40 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRC28Q86X40 MIR4674-201ENST00000582457 87 ntBASIC15.76■□□□□ 0.11
LRRC28Q86X40 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.76■□□□□ 0.11
LRRC28Q86X40 AC140113.3-201ENST00000605663 199 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms