Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP1BQ7LBR1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP1BQ7LBR1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP1BQ7LBR1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CHMP1BQ7LBR1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP1BQ7LBR1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP1BQ7LBR1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP1BQ7LBR1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.35■□□□□ 0.21
CHMP1BQ7LBR1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP1BQ7LBR1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP1BQ7LBR1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP1BQ7LBR1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.35■□□□□ 0.21
CHMP1BQ7LBR1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP1BQ7LBR1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP1BQ7LBR1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP1BQ7LBR1 AL353692.3-201ENST00000407031 1396 ntBASIC16.35■□□□□ 0.21
CHMP1BQ7LBR1 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP1BQ7LBR1 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP1BQ7LBR1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP1BQ7LBR1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP1BQ7LBR1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP1BQ7LBR1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP1BQ7LBR1 SDHAP2-201ENST00000455183 2001 ntBASIC16.35■□□□□ 0.21
CHMP1BQ7LBR1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP1BQ7LBR1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 VENTXP7-201ENST00000475503 772 ntBASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 AL390719.2-201ENST00000606993 987 ntBASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 AC092119.3-201ENST00000612618 583 ntBASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 GMCL1P1-201ENST00000463439 1581 ntBASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 AC124067.4-201ENST00000519691 2379 ntBASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP1BQ7LBR1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.33■□□□□ 0.21
CHMP1BQ7LBR1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHMP1BQ7LBR1 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CHMP1BQ7LBR1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHMP1BQ7LBR1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CHMP1BQ7LBR1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 MIR3652-201ENST00000579335 131 ntBASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 AP002414.4-201ENST00000589764 1148 ntBASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 AC011270.2-201ENST00000624293 2550 ntBASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms