Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNKSR3Q6P9H4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNKSR3Q6P9H4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNKSR3Q6P9H4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNKSR3Q6P9H4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CNKSR3Q6P9H4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNKSR3Q6P9H4 ACTG1P4-201ENST00000425123 1122 ntBASIC18.91■□□□□ 0.62
CNKSR3Q6P9H4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNKSR3Q6P9H4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNKSR3Q6P9H4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.91■□□□□ 0.62
CNKSR3Q6P9H4 AC025678.2-201ENST00000562061 970 ntBASIC18.91■□□□□ 0.62
CNKSR3Q6P9H4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNKSR3Q6P9H4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.91■□□□□ 0.62
CNKSR3Q6P9H4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
CNKSR3Q6P9H4 AL121761.2-201ENST00000598007 1648 ntBASIC18.91■□□□□ 0.62
CNKSR3Q6P9H4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNKSR3Q6P9H4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNKSR3Q6P9H4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.91■□□□□ 0.62
CNKSR3Q6P9H4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNKSR3Q6P9H4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNKSR3Q6P9H4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNKSR3Q6P9H4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNKSR3Q6P9H4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
CNKSR3Q6P9H4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNKSR3Q6P9H4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 AC022145.2-201ENST00000598203 171 ntBASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 AL590787.1-201ENST00000568856 1315 ntBASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.9■□□□□ 0.62
CNKSR3Q6P9H4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CNKSR3Q6P9H4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CNKSR3Q6P9H4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.89■□□□□ 0.62
CNKSR3Q6P9H4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNKSR3Q6P9H4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.89■□□□□ 0.61
CNKSR3Q6P9H4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNKSR3Q6P9H4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.89■□□□□ 0.61
CNKSR3Q6P9H4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNKSR3Q6P9H4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.89■□□□□ 0.61
CNKSR3Q6P9H4 AC023141.5-201ENST00000458585 616 ntBASIC18.89■□□□□ 0.61
CNKSR3Q6P9H4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.89■□□□□ 0.61
CNKSR3Q6P9H4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.89■□□□□ 0.61
CNKSR3Q6P9H4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CNKSR3Q6P9H4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNKSR3Q6P9H4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNKSR3Q6P9H4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.89■□□□□ 0.61
CNKSR3Q6P9H4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNKSR3Q6P9H4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNKSR3Q6P9H4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNKSR3Q6P9H4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 FAM185BP-201ENST00000443595 716 ntBASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 COX20P2-201ENST00000452636 358 ntBASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms