Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.14■□□□□ 0.98
RNF20Q5VTR2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RNF20Q5VTR2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
RNF20Q5VTR2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
RNF20Q5VTR2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF20Q5VTR2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
RNF20Q5VTR2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF20Q5VTR2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF20Q5VTR2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF20Q5VTR2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF20Q5VTR2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF20Q5VTR2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF20Q5VTR2 FAM86EP-206ENST00000510506 987 ntBASIC21.14■□□□□ 0.97
RNF20Q5VTR2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF20Q5VTR2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF20Q5VTR2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF20Q5VTR2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF20Q5VTR2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF20Q5VTR2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF20Q5VTR2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF20Q5VTR2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.14■□□□□ 0.97
RNF20Q5VTR2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 AC005104.2-201ENST00000427818 678 ntBASIC21.13■□□□□ 0.97
RNF20Q5VTR2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 BX276092.5-203ENST00000456199 560 ntBASIC21.13■□□□□ 0.97
RNF20Q5VTR2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 AC087388.1-201ENST00000571370 1112 ntBASIC21.13■□□□□ 0.97
RNF20Q5VTR2 AC011840.4-201ENST00000578471 627 ntBASIC21.13■□□□□ 0.97
RNF20Q5VTR2 AL121672.3-201ENST00000608644 468 ntBASIC21.13■□□□□ 0.97
RNF20Q5VTR2 AL353801.3-201ENST00000609898 542 ntBASIC21.13■□□□□ 0.97
RNF20Q5VTR2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF20Q5VTR2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF20Q5VTR2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF20Q5VTR2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF20Q5VTR2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF20Q5VTR2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF20Q5VTR2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF20Q5VTR2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF20Q5VTR2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF20Q5VTR2 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF20Q5VTR2 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.12■□□□□ 0.97
RNF20Q5VTR2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.12■□□□□ 0.97
RNF20Q5VTR2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF20Q5VTR2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF20Q5VTR2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF20Q5VTR2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
RNF20Q5VTR2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
RNF20Q5VTR2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RNF20Q5VTR2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF20Q5VTR2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
RNF20Q5VTR2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
RNF20Q5VTR2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
RNF20Q5VTR2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms