Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
LRRK2Q5S007 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRRK2Q5S007 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRRK2Q5S007 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRK2Q5S007 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRK2Q5S007 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRK2Q5S007 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRK2Q5S007 TREML5P-201ENST00000421694 576 ntBASIC15.2■□□□□ 0.02
LRRK2Q5S007 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.2■□□□□ 0.02
LRRK2Q5S007 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRK2Q5S007 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
LRRK2Q5S007 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.2■□□□□ 0.02
LRRK2Q5S007 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.2■□□□□ 0.02
LRRK2Q5S007 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LRRK2Q5S007 MYLKP1-201ENST00000509077 1580 ntBASIC15.2■□□□□ 0.02
LRRK2Q5S007 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRK2Q5S007 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
LRRK2Q5S007 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRK2Q5S007 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRK2Q5S007 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.2■□□□□ 0.02
LRRK2Q5S007 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.2■□□□□ 0.02
LRRK2Q5S007 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.2■□□□□ 0.02
LRRK2Q5S007 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.2■□□□□ 0.02
LRRK2Q5S007 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.2■□□□□ 0.02
LRRK2Q5S007 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.2■□□□□ 0.02
LRRK2Q5S007 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRK2Q5S007 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.2■□□□□ 0.02
LRRK2Q5S007 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRK2Q5S007 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LRRK2Q5S007 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRK2Q5S007 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRK2Q5S007 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LRRK2Q5S007 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRK2Q5S007 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRK2Q5S007 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRK2Q5S007 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRK2Q5S007 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRK2Q5S007 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRK2Q5S007 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LRRK2Q5S007 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
LRRK2Q5S007 PTCHD3P3-201ENST00000403073 906 ntBASIC15.19■□□□□ 0.02
LRRK2Q5S007 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRK2Q5S007 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRK2Q5S007 RBPMS2P1-201ENST00000437762 623 ntBASIC15.19■□□□□ 0.02
LRRK2Q5S007 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRK2Q5S007 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.19■□□□□ 0.02
LRRK2Q5S007 PKD1P6-201ENST00000343738 4769 ntBASIC15.19■□□□□ 0.02
LRRK2Q5S007 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRK2Q5S007 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRK2Q5S007 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRK2Q5S007 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.19■□□□□ 0.02
LRRK2Q5S007 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.19■□□□□ 0.02
LRRK2Q5S007 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.19■□□□□ 0.02
LRRK2Q5S007 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.19■□□□□ 0.02
LRRK2Q5S007 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.19■□□□□ 0.02
LRRK2Q5S007 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.19■□□□□ 0.02
LRRK2Q5S007 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.19■□□□□ 0.02
LRRK2Q5S007 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRK2Q5S007 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC15.19■□□□□ 0.02
LRRK2Q5S007 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.19■□□□□ 0.02
LRRK2Q5S007 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRK2Q5S007 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC15.19■□□□□ 0.02
LRRK2Q5S007 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.19■□□□□ 0.02
LRRK2Q5S007 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LRRK2Q5S007 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRK2Q5S007 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRK2Q5S007 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRK2Q5S007 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.18■□□□□ 0.02
LRRK2Q5S007 AC098614.1-201ENST00000368528 745 ntBASIC15.18■□□□□ 0.02
LRRK2Q5S007 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRRK2Q5S007 AC092552.1-201ENST00000547243 906 ntBASIC15.18■□□□□ 0.02
LRRK2Q5S007 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
LRRK2Q5S007 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.18■□□□□ 0.02
LRRK2Q5S007 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.18■□□□□ 0.02
LRRK2Q5S007 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRK2Q5S007 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRK2Q5S007 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRK2Q5S007 AC100757.3-201ENST00000622361 1406 ntBASIC15.18■□□□□ 0.02
LRRK2Q5S007 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRK2Q5S007 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LRRK2Q5S007 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRK2Q5S007 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LRRK2Q5S007 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRK2Q5S007 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRK2Q5S007 AC140658.5-201ENST00000438532 169 ntBASIC15.18■□□□□ 0.02
LRRK2Q5S007 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.18■□□□□ 0.02
LRRK2Q5S007 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.18■□□□□ 0.02
LRRK2Q5S007 MIR4538-201ENST00000581377 78 ntBASIC15.18■□□□□ 0.02
LRRK2Q5S007 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRK2Q5S007 MIR6787-201ENST00000616675 61 ntBASIC15.18■□□□□ 0.02
LRRK2Q5S007 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRK2Q5S007 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRK2Q5S007 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
LRRK2Q5S007 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.18■□□□□ 0.02
LRRK2Q5S007 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.18■□□□□ 0.02
LRRK2Q5S007 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LRRK2Q5S007 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.17■□□□□ 0.02
LRRK2Q5S007 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRRK2Q5S007 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRRK2Q5S007 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms