Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TPM4P67936 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPM4P67936 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPM4P67936 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
TPM4P67936 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPM4P67936 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.87■□□□□ 0.77
TPM4P67936 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TPM4P67936 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TPM4P67936 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPM4P67936 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPM4P67936 CCR12P-201ENST00000446203 998 ntBASIC19.87■□□□□ 0.77
TPM4P67936 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.87■□□□□ 0.77
TPM4P67936 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.87■□□□□ 0.77
TPM4P67936 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.87■□□□□ 0.77
TPM4P67936 AL359736.2-201ENST00000621992 437 ntBASIC19.87■□□□□ 0.77
TPM4P67936 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPM4P67936 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPM4P67936 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TPM4P67936 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPM4P67936 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TPM4P67936 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPM4P67936 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.87■□□□□ 0.77
TPM4P67936 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.86■□□□□ 0.77
TPM4P67936 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TPM4P67936 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TPM4P67936 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TPM4P67936 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.86■□□□□ 0.77
TPM4P67936 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.86■□□□□ 0.77
TPM4P67936 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TPM4P67936 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TPM4P67936 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TPM4P67936 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.86■□□□□ 0.77
TPM4P67936 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TPM4P67936 AL355355.2-201ENST00000442321 338 ntBASIC19.86■□□□□ 0.77
TPM4P67936 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.86■□□□□ 0.77
TPM4P67936 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TPM4P67936 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TPM4P67936 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TPM4P67936 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.86■□□□□ 0.77
TPM4P67936 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TPM4P67936 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.86■□□□□ 0.77
TPM4P67936 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.86■□□□□ 0.77
TPM4P67936 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TPM4P67936 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TPM4P67936 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.86■□□□□ 0.77
TPM4P67936 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TPM4P67936 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TPM4P67936 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.86■□□□□ 0.77
TPM4P67936 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TPM4P67936 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPM4P67936 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TPM4P67936 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.85■□□□□ 0.77
TPM4P67936 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TPM4P67936 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TPM4P67936 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
TPM4P67936 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
TPM4P67936 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPM4P67936 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.85■□□□□ 0.77
TPM4P67936 BX088651.1-201ENST00000540551 451 ntBASIC19.85■□□□□ 0.77
TPM4P67936 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.85■□□□□ 0.77
TPM4P67936 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.85■□□□□ 0.77
TPM4P67936 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TPM4P67936 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.85■□□□□ 0.77
TPM4P67936 AL023803.3-201ENST00000615559 522 ntBASIC19.85■□□□□ 0.77
TPM4P67936 REXO1L10P-201ENST00000615707 1290 ntBASIC19.85■□□□□ 0.77
TPM4P67936 REXO1L12P-201ENST00000622156 912 ntBASIC19.85■□□□□ 0.77
TPM4P67936 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.85■□□□□ 0.77
TPM4P67936 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPM4P67936 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPM4P67936 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.85■□□□□ 0.77
TPM4P67936 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TPM4P67936 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.85■□□□□ 0.77
TPM4P67936 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPM4P67936 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPM4P67936 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TPM4P67936 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
TPM4P67936 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.84■□□□□ 0.77
TPM4P67936 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPM4P67936 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.84■□□□□ 0.77
TPM4P67936 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.84■□□□□ 0.77
TPM4P67936 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TPM4P67936 AL118508.1-201ENST00000613502 2345 ntBASIC19.84■□□□□ 0.77
TPM4P67936 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPM4P67936 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TPM4P67936 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TPM4P67936 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TPM4P67936 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TPM4P67936 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPM4P67936 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
TPM4P67936 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPM4P67936 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPM4P67936 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPM4P67936 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
TPM4P67936 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TPM4P67936 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TPM4P67936 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
TPM4P67936 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.83■□□□□ 0.77
TPM4P67936 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TPM4P67936 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.83■□□□□ 0.77
TPM4P67936 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms