Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.26■□□□□ 0.35
YBX1P67809 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
YBX1P67809 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
YBX1P67809 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
YBX1P67809 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
YBX1P67809 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.26■□□□□ 0.35
YBX1P67809 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
YBX1P67809 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
YBX1P67809 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
YBX1P67809 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.26■□□□□ 0.35
YBX1P67809 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
YBX1P67809 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
YBX1P67809 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.26■□□□□ 0.35
YBX1P67809 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
YBX1P67809 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
YBX1P67809 AC092329.2-201ENST00000598402 547 ntBASIC17.26■□□□□ 0.35
YBX1P67809 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
YBX1P67809 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
YBX1P67809 AL353801.3-201ENST00000609898 542 ntBASIC17.26■□□□□ 0.35
YBX1P67809 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
YBX1P67809 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.26■□□□□ 0.35
YBX1P67809 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.26■□□□□ 0.35
YBX1P67809 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.26■□□□□ 0.35
YBX1P67809 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
YBX1P67809 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.26■□□□□ 0.35
YBX1P67809 AC233702.3-201ENST00000578656 1387 ntBASIC17.26■□□□□ 0.35
YBX1P67809 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
YBX1P67809 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
YBX1P67809 AD000864.1-201ENST00000624076 2295 ntBASIC17.26■□□□□ 0.35
YBX1P67809 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
YBX1P67809 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
YBX1P67809 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
YBX1P67809 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
YBX1P67809 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.25■□□□□ 0.35
YBX1P67809 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.25■□□□□ 0.35
YBX1P67809 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
YBX1P67809 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
YBX1P67809 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.25■□□□□ 0.35
YBX1P67809 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
YBX1P67809 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.25■□□□□ 0.35
YBX1P67809 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
YBX1P67809 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
YBX1P67809 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
YBX1P67809 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.25■□□□□ 0.35
YBX1P67809 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.25■□□□□ 0.35
YBX1P67809 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
YBX1P67809 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.25■□□□□ 0.35
YBX1P67809 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
YBX1P67809 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.25■□□□□ 0.35
YBX1P67809 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
YBX1P67809 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
YBX1P67809 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
YBX1P67809 KRT18P55-202ENST00000578578 1546 ntBASIC17.25■□□□□ 0.35
YBX1P67809 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
YBX1P67809 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.25■□□□□ 0.35
YBX1P67809 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
YBX1P67809 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
YBX1P67809 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
YBX1P67809 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
YBX1P67809 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
YBX1P67809 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
YBX1P67809 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
YBX1P67809 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
YBX1P67809 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
YBX1P67809 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
YBX1P67809 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
YBX1P67809 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.24■□□□□ 0.35
YBX1P67809 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
YBX1P67809 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
YBX1P67809 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
YBX1P67809 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
YBX1P67809 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
YBX1P67809 HCG4P8-203ENST00000443049 980 ntBASIC17.24■□□□□ 0.35
YBX1P67809 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
YBX1P67809 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.24■□□□□ 0.35
YBX1P67809 AP000867.3-201ENST00000524675 377 ntBASIC17.24■□□□□ 0.35
YBX1P67809 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.24■□□□□ 0.35
YBX1P67809 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
YBX1P67809 AC011676.5-201ENST00000624864 2660 ntBASIC17.24■□□□□ 0.35
YBX1P67809 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.24■□□□□ 0.35
YBX1P67809 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
YBX1P67809 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.24■□□□□ 0.35
YBX1P67809 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
YBX1P67809 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
YBX1P67809 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.24■□□□□ 0.35
YBX1P67809 AC009949.1-201ENST00000623048 1830 ntBASIC17.24■□□□□ 0.35
YBX1P67809 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
YBX1P67809 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
YBX1P67809 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
YBX1P67809 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
YBX1P67809 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
YBX1P67809 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
YBX1P67809 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
YBX1P67809 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
YBX1P67809 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
YBX1P67809 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
YBX1P67809 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.23■□□□□ 0.35
YBX1P67809 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.23■□□□□ 0.35
YBX1P67809 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
YBX1P67809 AC011840.4-201ENST00000578471 627 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms